Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02430 ATGGCGGAATGCATTGACGTGAAGCTCTCTCCTGCACCGGACCAAAGGATTCCGTTGATGAGATCAAGAAGAGGACGGCGGCGCGGCGACACGTGGGTGGTGTCGGTGTTCGTCATAATCCAAATCGGTGTTTTCATCGCCACCATGCTCGTCAACGATTGCTGGAACAATTCTCACGGCGATTGCGTTCTCCAACCCCTCGGAAGGTTCTCCTTCCAGCCTCTTCCCGAGAATCCTCTCTTGGGCCCTTCTCAGTCGAAGTTAGATGAAATGGGAGCTCTTCGATGGAACCTTTTGACAGAGCATCATCAAACATGGCGCCTTTTCACATTTCCATTTCTGCATGCTGGACTCTTCCACCTGCTCCTCAATCTCTCCAGTGTCATCTATGTGGGAGTTAACCTAGAGCACCACTTTGGACCCATAAGGATTGGTATAATCTATGCATTGTCTGCCTTTGTGGGTTCCTTGGTGGCTTCTCTTTTTCTCCAAAACATCCCCGCTGTTGGTGCTTCCGGTGCTTTATATGGATTACTGGGAACATTGCTTTCGGAACTTGTTTGGAACTGGAAATTCCATTCCAATAAGATTTCAGCAATAGCATCATTAGTCTTTGTCTTTGTGTGCAACTTCGTCCTTGGTTTTCTGCCTTATGTAGACAATTTTGCAAGCATGGGAGGTTTCATATCAGGATTCCTTCTTGGATCTGTTTTTTTACTATGCCCTCAGATCCAACCTGTAGCTCCAAATAAAGGAGGCCTGATTGATTATGGGGTCAAAAGTTACGTCAAGTTAAAGTTGAAGGAAAAGCTGGACAGACCAGTTCTCAGGATTGTTTCTCTTATCCTCTTCAGCCTTTTATTGGCTGGTTGTCTTGTGGCTGTTCTTCATGGAATCAACATCAGCAGTTATTGCACATGGTGTCCATATGTCGACTGTATCCCTTTTACAAGCTGGCACTGCAAAGACACAGAAACCTCTTGTGAGACAATGGTGAGCAATGCTCAGCTGACAATGACCTGTATTGGGAATGGCAATTTCCGAGTATTTCCTTTTACCAACATCTCTCGGGCAAGTGAGCTGTTATTGAGTATGCATGCCCTCGCCGCCGCAGCCACCGCATTTACAGTTAAAGGCCATCAAGCCAGAGATGAGTGCACTGACACTTAA 1170 0.465 MAECIDVKLSPAPDQRIPLMRSRRGRRRGDTWVVSVFVIIQIGVFIATMLVNDCWNNSHGDCVLQPLGRFSFQPLPENPLLGPSQSKLDEMGALRWNLLTEHHQTWRLFTFPFLHAGLFHLLLNLSSVIYVGVNLEHHFGPIRIGIIYALSAFVGSLVASLFLQNIPAVGASGALYGLLGTLLSELVWNWKFHSNKISAIASLVFVFVCNFVLGFLPYVDNFASMGGFISGFLLGSVFLLCPQIQPVAPNKGGLIDYGVKSYVKLKLKEKLDRPVLRIVSLILFSLLLAGCLVAVLHGINISSYCTWCPYVDCIPFTSWHCKDTETSCETMVSNAQLTMTCIGNGNFRVFPFTNISRASELLLSMHALAAAATAFTVKGHQARDECTDT 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02430 389 PANTHER RHOMBOID-RELATED 12 359 IPR002610 GO:0004252|GO:0006508|GO:0016021
Gma04g02430 389 Pfam Rhomboid family 101 239 IPR022764 GO:0004252|GO:0016021
Gma04g02430 389 Gene3D - 27 241 IPR035952 -
Gma04g02430 389 SUPERFAMILY Rhomboid-like 29 243 IPR035952 -
Gma04g02430 389 PANTHER RHOMBOID-LIKE PROTEIN 8 12 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02430 Gma-Chr4 54691545 54694675 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02430 - - gmx:100793747 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02430 04 54691545 54694675 Gma04g02430 04 54691545 54694675 ECH