Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02428 ATGGTTGACCACGATTTGCAACAAGAAACTCAAAAAGATTCATACATATCTACACTCTGCTCTCTCCTTAATCATTATCTACCTTTCTTTCATTCCCCTGTTCTCTCTGTTTCTCTGTTCCCCAGTTCCCGTCAAAACGCACACtttcccatttcccatttcccatttcTGGTTCAACCCATGGACTCCCAACCGGGTCTCTCTCTTGGGTTAAGCGTCCCTCTCTCTTCACCCGCGGCTCCACTCTGTGATACTACCTCTGTTCTGTGGCGTTTATTTAACAAAAGACACCCCATAAAGGAGGAAGAAGAAGAAGACGAAGACTATGGTGAAACGATTAACTTCATGGACCAGAGCGTGAAGAGGAAGATAGAGGGACACCAACAACCCTGTTTCCCTTCGAAGCGCGTGGCAGTGGATTCCTCAGTGGGGTGGTGGAACCAGCCACTGGGCGTTGCGGACCCCGAGATTTTTTATATCATGGGGAAGGAAAAACAAAGACAGTTTAAGGGAATTGAGTTAATTGCTTCGGAAAATTTCGTGTGCAGAGCAGTGATGGAAGCTTTGGGAAGCCATCTAAGCAACAAGTACTCTGAGGGAATGCCTGGTGCTAAGTACTACACTGGTAATCAATACATTGATGAGATTGAGTTTCTCTGTTGCCAGCGTGCGTTGTTGGCTTTTGATCTTCACCCCAACAATTGGGGTGTTAATGTTCAACCTTATTCTTGTACTTCTGCTAATTTCGCTGTGTACACTGGGATTTTGCATCCCGGGGATAGGATTATGGGTCTTGATTCGCCTTCTGGGGGGCATTTGAGTCATGGTTATTATACTTTAGGGGGAAAGAAGGTTTCAGCTGCTTCTATTTTCTTTGAGACTTTGCCTTATAAGGTTAATCCGCAGAGTGGTTACATAGACTATGATAAGCTTGAGGAAAAAGCGCTGGATTTTAGGCCTAAGATACTTATCTGTGGTGGGAGTTCGTATCCAAGGGAATGGGACTATGCGAGGTTCAGACAGGTTGCTGATAAGTGTGGGGCAGTGTTGATGTGTGATATGGCTCATATCAGTGGTCTTGTAGCGGCTAAGGAAGTAGCTAGTCCATTTGATTACTGTGATATTGTCACCTCAACCACTCACAAAAGTCTCCGAGGTCCAAGGGGAGGTATCATCTTTTATAGAAGGGGGGCAAAACCAAGGAAGCAAGGTTTCGTTCATAATCATGGAGATGATAGTAATTATGATTTCGAGGAGAAAATAAACTTTGCTTTATATCCATCGTTACAAGGAGGCCCCCACAATAATCATATTGCTGCTCTTGCCATAGCTTTAAAACAAGTTGCAACTCCAGAGTACAAAGCATACATGCAGCAGGTGAAGAGAAATGCGCAGGCATTAGCATCTGCCTTGTTGAGAAGAAATTTCAGATTGGTGACTGATGGGACCGACAATCATCTTTTGCTATGGGATCTAACAGCACTTGGCTTAATTGACAGAAACTATGAAAAGGTCTGTGAGGCGTGTCGCATCACTCTCAATAAATGTGCCATTTATGGTTCGATTTCTCCTGGAGGAGTGAGAATTGGTACTCCTGCAATGACATCTAGAGGCTGTTTAGAGGAAGATTTTGAAACCATAGCTGATTTTCTTCGTAGGGCAGCTCAGATTACCAGCATTGTGCAAAGAGAACATGGGAAATCATGCAAAGATTTCCTCAAGGGTCTTCAGAATAACAAAGATATTTCTGAGCTCAGAAATCGGGTTGAGACATTCAGTTCCCAGTTTGCAATGCCAGGCTTCGATATTTGA 1812 0.4338 MVDHDLQQETQKDSYISTLCSLLNHYLPFFHSPVLSVSLFPSSRQNAHFPISHFPFLVQPMDSQPGLSLGLSVPLSSPAAPLCDTTSVLWRLFNKRHPIKEEEEEDEDYGETINFMDQSVKRKIEGHQQPCFPSKRVAVDSSVGWWNQPLGVADPEIFYIMGKEKQRQFKGIELIASENFVCRAVMEALGSHLSNKYSEGMPGAKYYTGNQYIDEIEFLCCQRALLAFDLHPNNWGVNVQPYSCTSANFAVYTGILHPGDRIMGLDSPSGGHLSHGYYTLGGKKVSAASIFFETLPYKVNPQSGYIDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQVADKCGAVLMCDMAHISGLVAAKEVASPFDYCDIVTSTTHKSLRGPRGGIIFYRRGAKPRKQGFVHNHGDDSNYDFEEKINFALYPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKRNAQALASALLRRNFRLVTDGTDNHLLLWDLTALGLIDRNYEKVCEACRITLNKCAIYGSISPGGVRIGTPAMTSRGCLEEDFETIADFLRRAAQITSIVQREHGKSCKDFLKGLQNNKDISELRNRVETFSSQFAMPGFDI 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02428 603 Gene3D - 179 458 IPR015421 GO:0003824
Gma04g02428 603 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 7 122 603 - -
Gma04g02428 603 Hamap Serine hydroxymethyltransferase [glyA]. 149 600 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Gma04g02428 603 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 374 390 IPR019798 GO:0030170
Gma04g02428 603 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 122 603 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Gma04g02428 603 SUPERFAMILY PLP-dependent transferases 145 600 IPR015424 -
Gma04g02428 603 CDD SHMT 154 592 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Gma04g02428 603 Pfam Serine hydroxymethyltransferase 152 550 IPR039429 -
Gma04g02428 603 Gene3D Aspartate Aminotransferase, domain 1 154 599 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02428 Gma-Chr4 54671236 54677399 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02428 K00600 - gmx:100793208 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02428 04 54671236 54677399 Gma04g02428 04 54671236 54677399 ECH