Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02422 ATGGACTTACTGGAGTTATGGGCAATTTTCGGCCCCGGCGTCGCCGGCGCCGTCTTCGGCGCCGGATGGTGGATCTGGCTTGACGCCGTCGTCTGCAGTACCGTCACCGTTCCCTTCCTTCATTACCTTCCCGGAATTTTCGCATCTCTTGCGGCTTTGATGTTCAATTGCGTTAGAAAAGAAGACATCGATTATTCTCCCTACGACGAAGGCGAGTGGAGACTGAAGCTGTGGCTCTTCATTGCATATGTTGTATCCTTTGTTTCTTTAGCTGGATCAGCAGGCCTGCTGATCCAAGATTCACTTGATAAATCCGCCCCTTCAGTTTGGACTGGAGTTGCAGGTGTTTTGCAGTGTGTTTTTGTCTTGATCTGTGGACTGGTGGTTCTTGGCAGTGATTTCCCGACACAATTATGCCGTCCTTCATTTGTACTCTCAACTGCAAAGTCAGTCCAACGCAAAAGAGTTGTCCTCAAAAACTTTCCTAAGCCAGTGAACAACAACATGGACTCCAAGTCTGGAAGAACACTGTTGGTTATGACAATGATTTTACTAATTCAACAGTTgtgctcaatcaatcgAATCTTTGAGCCAAGGCATGACATTCTTGAAGCTCTTCGAGGTAAACCTTTGATGCTTGCAATTGGCACAAAAGATGAAGACGTACAAACCATGGCACAAGACCAAAACGCAGCCAACACATGGGTCCaaaccaatgtcattccatacataaaggacgttaattttgggTACATAATCATAGGTGACGAGATAACACCGGGGCCTGTAGCACCCTACGTTGCAAAGGCTGGAACATTCATCAATGAAACAACAAACATTATCAAACAGATTGCAACAATTTTGTTGCAACATGGTTCACCCGTGATGATTAACTCGTACCCTTACCTTGCATATTCCTCTGATCCCCAACACGTTTCTCTAGACTATGCACTGTTTAAGTCAACAAGTCCTGTGGTCACTGATGATGGGGGTTACAAGTACTACAATTTGTTTGATGCCATGCTTGATGCTTATCATGCTGCTTTTTGGCTTGTCGAACCTCATTTTTGTTTTGTGTCTGAAATTGGTTGA 1092 0.4286 MDLLELWAIFGPGVAGAVFGAGWWIWLDAVVCSTVTVPFLHYLPGIFASLAALMFNCVRKEDIDYSPYDEGEWRLKLWLFIAYVVSFVSLAGSAGLLIQDSLDKSAPSVWTGVAGVLQCVFVLICGLVVLGSDFPTQLCRPSFVLSTAKSVQRKRVVLKNFPKPVNNNMDSKSGRTLLVMTMILLIQQLCSINRIFEPRHDILEALRGKPLMLAIGTKDEDVQTMAQDQNAANTWVQTNVIPYIKDVNFGYIIIGDEITPGPVAPYVAKAGTFINETTNIIKQIATILLQHGSPVMINSYPYLAYSSDPQHVSLDYALFKSTSPVVTDDGGYKYYNLFDAMLDAYHAAFWLVEPHFCFVSEIG 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02422 363 Pfam Uncharacterised protein family (UPF0220) 14 129 IPR007919 -
Gma04g02422 363 PANTHER OS02G0566900 PROTEIN 3 130 - -
Gma04g02422 363 Pfam Glycosyl hydrolases family 17 194 262 IPR000490 GO:0004553|GO:0005975
Gma04g02422 363 Pfam Glycosyl hydrolases family 17 266 348 IPR000490 GO:0004553|GO:0005975
Gma04g02422 363 SUPERFAMILY (Trans)glycosidases 194 348 IPR017853 -
Gma04g02422 363 Gene3D Glycosidases 179 266 - -
Gma04g02422 363 PANTHER SMALL MEMBRANE PROTEIN-RELATED 3 130 IPR007919 -
Gma04g02422 363 Gene3D Glycosidases 267 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02422 Gma-Chr4 54609664 54617187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02422 194 349 Glycoside Hydrolase AT1G77790 40.314 2.33e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02422 - - gmx:100778018 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02422 04 54609664 54617187 Gma04g02422 04 54609664 54617187 ECH