Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02401 ATGGGTTTCTCCAAGCAACAGCTTCTTGCGCGGTTAAAGGAGCTTCAGATTCCATTTTCCCAGTATGAACATCCAGTTGTTTTGACCGTTGACGCTCAGAAAAGCAGGCTGTATGTTGTTTCTGCTTTAGCTGCAGTGTTATCTCAGCGGCTTGGTTTGGGAAAAGGTGGTCTCAGAATGGCACCTGAGGAGGCTTTGGGTGAAGTACTTCAGGTACCCTTGGGTTGTGTCACTCCATTTGCACTTGTGAATGAATCAGCACGAGATGTTTCACTGCTATTGGATCAAGGGTTCAAGTCTCAGAAGCACTGCTTCTTCCATCCACTGTCCAATGACATGTCTATATGGAATTCTTTTGCTAGTATTTGTTCAACACCATGGGTCCACCAATTCTTTCATGCTTACTATTTGACAATTTTGGAACTTAAATATTCATGGTGTTTTTTTCTTAAATCAATTGGAAGAAATCGCTCATACGTTGATTTGGAGGCCAATCCTAAAGTGGGAAAAGATCAACCCCCTGATCTAGCTGCACTAGTTCCATCTGGTTTGATAGTCTTACCCGATCAACCACAAAAACAATCTTCTTCACAGGTTCCTGAGGATGCAAACCATGTTTCCATGGATAATGGAACCAATACAGTTTCTGCTAAAGTTGTCAAGCCATCCTCTGGCAGGAAAAGTTCAAAGGGGACACCAGCAAAAAATGTTAATTCATCAGGCTCCTTTGCAGATGCTGGGCAATTCGTTGAAGAGATATTGCAAAAAACATCACAGTTATTGCTTTCAGAGGTCAAGGATGAAAATATAAAGTTACATGGGGAGCAGCTCGGTACTGTGTTATCTGACAAATTACTGAAAAACCTCAATGCAGAGTTTAAGAACCTTGCTATGATTTTTAAGAACACAGCATATACGGAAGGGTTCCATGCCGGTACTCATTATAGGCCCCCGCTCATGTGA 963 0.4216 MGFSKQQLLARLKELQIPFSQYEHPVVLTVDAQKSRLYVVSALAAVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARDVSLLLDQGFKSQKHCFFHPLSNDMSIWNSFASICSTPWVHQFFHAYYLTILELKYSWCFFLKSIGRNRSYVDLEANPKVGKDQPPDLAALVPSGLIVLPDQPQKQSSSQVPEDANHVSMDNGTNTVSAKVVKPSSGRKSSKGTPAKNVNSSGSFADAGQFVEEILQKTSQLLLSEVKDENIKLHGEQLGTVLSDKLLKNLNAEFKNLAMIFKNTAYTEGFHAGTHYRPPLM 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02401 320 Pfam Aminoacyl-tRNA editing domain 46 118 IPR007214 GO:0002161
Gma04g02401 320 SUPERFAMILY YbaK/ProRS associated domain 3 119 IPR036754 GO:0002161
Gma04g02401 320 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 1 316 IPR040285 -
Gma04g02401 320 MobiDBLite consensus disorder prediction 190 241 - -
Gma04g02401 320 Gene3D - 32 125 IPR036754 GO:0002161
Gma04g02401 320 PANTHER PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED 1 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02401 Gma-Chr4 54396624 54400812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02401 - - gmx:100817904 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02401 04 54396624 54400812 Gma04g02401 04 54396624 54400812 ECH
Gma04g02401 04 54396624 54400812 Gma06g00997 06 9288140 9292476 GST