Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02387 ATGGAAGAGAGCTTCGTTTTCCAGTGGAGCGTTATCAGATCTCTCTTGTCCATCCTTCAGTGGTGGGCCTTCAATGTCACTGTCATCATCGTCAACAAGTGGATCTTTCAGAAATTGGATTTCAAGTTTCCCTTATCAGTTTCCTGTGTCCACTTTATCTGTTCATCCATTGGAGCATATGTGGTAATTAAGTTGCTGAAGCTTAAACCACTGATAACTGTTGACCCTGAAGATCGCTGGAGAAGAATCTTTCCAATGTCATTTGTGTTCTGTATTAACATTGTTCTGGGGAATGTGAGCCTACGATACATTCCAGTTTCTTTTATGCAGACAATAAAGTCATTCACACCTGCCACCACAGTTGTTTTGCAATGGCTAGTGTGGAGGAAGTATTTTGACTGGCGTATTTGGGCTTCTCTTATACCCATTGTTGGAGGGATTCTTCTCACATCTGTAACAGAGCTTAGTTTTAATATGTTTGGATTCTGTGCTGCCTTATTTGGCTGTTTGGCTACATCTACAAAGACTATTCTTGCAGAATCTCTTCTGCATGGATACAAATTTGACAGCATAAACACAGTTTATTACATGGCACCTTTTGCAACCATGATCTTGGCGCTTCCTGCCATGTTACTTGAAGGCAATGGAATCCTTGAATGGCTAAATACTCATCCATATCCTTGGTCGGCTCTCATCATTATTTTTAGCTCCGGGGTGTTGGCTTTCTGTCTTAACTTCTCAATTTTTTATGTGATTCACTCCACCACTGCTGTAACATTTAATGTTGCCGGAAATCTTAAGGTTGCAGTTGCCGTCCTTGTTTCTTGGCTGATATTTAGGAACCCAATTTCGTATTTAAATTCTGTTGGATGTACCGTGACTCTTGTGGGATGTACATTCTATGGTTATGTGAGGCACAAGCTCTCCCAACAGCCACAAGTCCCAGGAACTCCTCGGACACCCAGGACTCCCAGGACCCCTCGTAGTAAGATGGAGTTGCTTCCTCTTGTAAATGATAAATTAGAAGATAAGGTCTAG 1038 0.4181 MEESFVFQWSVIRSLLSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSSIGAYVVIKLLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLIPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILALPAMLLEGNGILEWLNTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNSVGCTVTLVGCTFYGYVRHKLSQQPQVPGTPRTPRTPRTPRSKMELLPLVNDKLEDKV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02387 345 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Gma04g02387 345 PANTHER GDP-MANNOSE TRANSPORTER GONST5 3 329 - -
Gma04g02387 345 Gene3D - 49 157 - -
Gma04g02387 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 71 152 - -
Gma04g02387 345 MobiDBLite consensus disorder prediction 310 331 - -
Gma04g02387 345 PANTHER SOLUTE CARRIER FAMILY 35 3 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02387 Gma-Chr4 54229555 54233174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02387 1 345 Organic Solute Cotransporters AT1G77610 88.728 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02387 K15285 - gmx:100809511 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02387 04 54229555 54233174 Gma04g02387 04 54229555 54233174 ECH
Gma04g02387 04 54229555 54233174 Gma06g01011 06 9445665 9450109 GST