Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02368 ATGGCGGGTAGGGTTTCGACGTGCTTCTTCTTCGTGTTTGCTCTTTCTCTCCTTCTTCCTTTTCAGATCTCCGCTGAGGAATCATCGGAGAAAGAGTTCGTACTCACATTGGATCACTCTAACTTTCATGACACTGTCAGCAAGCACGATTTCATCGTCGTCGAGTTCTACGCTCCATGGTGTGGCCACTGTAAGAAGCTTGCTCCCGAGTATGAGAAAGCTGCTTCTATCTTGAGTAGTCATGATCCTCCGGTTGTTTTGGCTAAAATTGATGCCAATGAGGAGAAGAACAAAGACCTTGCATCTCAATATGATGTTAGGGGATACCCAACAATTAAGATTCTGAGAAATGGGGGAAAGAATGTTCAGGAATACAAAGGTCCCCGTGAAGCAGATGGCATCGTTGACTATTTGAAGAAACAAAGTGGTCCTGCTTCAACTGAAATTAAATCTGCTGATGAAGCTACTGCTTTCATTGGTGAAAATAAAGTTGCTATTGTTGGAGTTTTCCCGAAATTTTCTGGAGAGGAGTTTGACAACTTTTCTGCCTTAGCAGAGAAGTTGCGTTCTGACTATGACTTCGGTCACACTCTGAATGCCAAACACCTTCCAAGAGGAGAGTCATCAGTTTCTGGTCCCGTAGTTAGGTTGTTCAAGCCATTCGATGAACTTTTTGTTGACTTCCAGGATTTCAATGTGGAAGCTCTAGAGAAATTTGTTGAGGAATCTAGTACCCCTGTTGTTACTGTCTTTAACAATGATCCGAGCAATCACCCTTTCGTTGCCAAATTCTTCAACAGTCCCAATGCAAAGGCAATGTTGTTCATCAACTTCACTGCCGAAGGTGCTGAATCTTTCAAATCAAAATACCGTGAAGCTGCTGAGCAACATAAACAACAGGGTGTAAGCTTTTTGGTGGGAGATGTTGAGTCTAGTCAAGGTGCTTTCCAGTATTTTGGACTGAAAGAAGAACAAGTACCTCTAATTATCATTCAACACAATGACGGGAAAAAGTTTTTTAAACCCAATTTGGAAGCTGATCACATTCCAACTTGGTTGAAGGCGTACAAGGATGGTAATGTTGCACCATTTGTGAAGTCTGAACCCATTCCTGAAGCTAACGATGAACCTGTTAAAGTGGTAGTTGGGAACAGTCTTGAGGACATTGTTTTCAAATCTGGGAAGAATGTTCTGCTGGAGTTTTATGCTCCCTGGTGTGGTCATTGCAAACAGTTGGCTCCAATATTGGACGAAGTTGCTATCTCATATCAAAGTGATGCTGATGTTGTTATTGCAAAACTGGATGCAACTGCCAACGATATCCCAAGTGAAACCTTTGATGTCCAAGGTTATCCAACCGTGTACTTCAGGTCAGCAAGTGGAAAGTTATCACAATACGAAGGGGGTAGGACCAAGGAAGACATCATAGAATTCATCGAAAAGAACCGGGACaaacctgctcagcaagaacaaggacaagataaacctgctcagcaagaacaaggacaagatgagcaagaaaaaggaaaagatgagcTTTGA 1542 0.4014 MAGRVSTCFFFVFALSLLLPFQISAEESSEKEFVLTLDHSNFHDTVSKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPVVLAKIDANEEKNKDLASQYDVRGYPTIKILRNGGKNVQEYKGPREADGIVDYLKKQSGPASTEIKSADEATAFIGENKVAIVGVFPKFSGEEFDNFSALAEKLRSDYDFGHTLNAKHLPRGESSVSGPVVRLFKPFDELFVDFQDFNVEALEKFVEESSTPVVTVFNNDPSNHPFVAKFFNSPNAKAMLFINFTAEGAESFKSKYREAAEQHKQQGVSFLVGDVESSQGAFQYFGLKEEQVPLIIIQHNDGKKFFKPNLEADHIPTWLKAYKDGNVAPFVKSEPIPEANDEPVKVVVGNSLEDIVFKSGKNVLLEFYAPWCGHCKQLAPILDEVAISYQSDADVVIAKLDATANDIPSETFDVQGYPTVYFRSASGKLSQYEGGRTKEDIIEFIEKNRDKPAQQEQGQDKPAQQEQGQDEQEKGKDEL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02368 513 SUPERFAMILY Thioredoxin-like 244 375 IPR036249 -
Gma04g02368 513 ProSitePatterns Thioredoxin family active site. 53 71 IPR017937 -
Gma04g02368 513 SUPERFAMILY Thioredoxin-like 345 483 IPR036249 -
Gma04g02368 513 CDD PDI_a_PDI_a'_C 377 479 - -
Gma04g02368 513 CDD PDI_b_family 146 242 - -
Gma04g02368 513 Pfam Thioredoxin 34 140 IPR013766 -
Gma04g02368 513 Pfam Thioredoxin 379 481 IPR013766 -
Gma04g02368 513 MobiDBLite consensus disorder prediction 480 513 - -
Gma04g02368 513 TIGRFAM ER_PDI_fam: protein disulfide isomerase 34 513 IPR005792 GO:0003756
Gma04g02368 513 Pfam Thioredoxin-like domain 170 353 - -
Gma04g02368 513 TIGRFAM pdi_dom: protein disulfide-isomerase domain 38 141 IPR005788 GO:0003756
Gma04g02368 513 TIGRFAM pdi_dom: protein disulfide-isomerase domain 383 482 IPR005788 GO:0003756
Gma04g02368 513 Gene3D Glutaredoxin 247 372 - -
Gma04g02368 513 CDD PDI_b'_family 263 357 - -
Gma04g02368 513 PRINTS Thioredoxin family signature 52 60 - -
Gma04g02368 513 PRINTS Thioredoxin family signature 60 69 - -
Gma04g02368 513 PRINTS Thioredoxin family signature 105 116 - -
Gma04g02368 513 Gene3D Glutaredoxin 373 486 - -
Gma04g02368 513 ProSiteProfiles Thioredoxin domain profile. 356 484 IPR013766 -
Gma04g02368 513 Gene3D Glutaredoxin 142 246 - -
Gma04g02368 513 ProSiteProfiles Thioredoxin domain profile. 12 143 IPR013766 -
Gma04g02368 513 PANTHER PROTEIN DISULFIDE-ISOMERASE 6 502 - -
Gma04g02368 513 SUPERFAMILY Thioredoxin-like 147 246 IPR036249 -
Gma04g02368 513 CDD PDI_a_family 35 138 - -
Gma04g02368 513 SUPERFAMILY Thioredoxin-like 34 144 IPR036249 -
Gma04g02368 513 PANTHER PROTEIN DISULFIDE ISOMERASE 6 502 - -
Gma04g02368 513 Gene3D Glutaredoxin 22 141 - -
Gma04g02368 513 ProSitePatterns Thioredoxin family active site. 398 416 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02368 Gma-Chr4 54075694 54079989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02368 K09580 - gmx:100170705 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02368 04 54075694 54079989 Gma06g01027 06 9594707 9603646 GST