Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02350 ATGGAACCGCCGGAGTGCCCGGTGTGTCTTCAATCCTTCGACGAGCGCGACGCAATTCATCGTGTCTTATCATGTGGTCACTCCGTCTGCCAAACTTGCCTCGCGGAGCTTCCGCAGCCGTACCCAGACACTATTCGGTTCCCCACGTGCACCCAGCTCGTGAAACTCTCCCTCCAACACTCCCCTTCTTCCTCCTCCGGTCATTCCATAAAACTGAATCAAAAGTCCACAATCAATTCTGGTTACGATCACCCTCCGTTCTGGTCCCCTGAGTTTTACGCTGCATGGAAGGATTGGATTCTCCCGAACTACGCCGTTTCAACCGATGATGTTGGTGTTCGCCGGTTCAGTTCAATATCTTCGTCCAAGGGTGGGATTTGCTTCGGAGTTAACCGCAGCGTGAGTCTGGCTCCTATTGTTTGTTGCTCTTCTCGGGATCATTCCAAGTTTAGGTTTAGTTATGTTGCATGGGTGATTAAGTGTTTGGAGGGGTTGAGCGAGGGTGCGAGGGGGGAGTTGGCGTTGATTCTAGAAGCTTCCGTGAGGCAGGGGAGGGTGTGTGGGGGTTTATGGGTTGTGGGGTGA 585 0.5299 MEPPECPVCLQSFDERDAIHRVLSCGHSVCQTCLAELPQPYPDTIRFPTCTQLVKLSLQHSPSSSSGHSIKLNQKSTINSGYDHPPFWSPEFYAAWKDWILPNYAVSTDDVGVRRFSSISSSKGGICFGVNRSVSLAPIVCCSSRDHSKFRFSYVAWVIKCLEGLSEGARGELALILEASVRQGRVCGGLWVVG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02350 194 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Gma04g02350 194 Pfam RING-type zinc-finger 6 41 IPR027370 -
Gma04g02350 194 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 80 IPR013083 -
Gma04g02350 194 ProSiteProfiles Zinc finger RING-type profile. 6 51 IPR001841 -
Gma04g02350 194 SUPERFAMILY RING/U-box 4 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02350 Gma-Chr4 53933522 53934167 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02350 - K03070 gmx:100793437 261.151