Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02340 ATGGCTTCCTCCCTCggcgacaacttcaaccttctctcgcctcaacagCAAGAGCTGGTGAAGATGCTATTGGATAACGGCCAAGAGCACCTGTTTCGCGATTGGCCTGCTCCCGGCGTTGACGACGACCACAAAAATGCGTTCTTCGACCAGCTGACTCGACTAGATTCGAGTTACCCTGGCGGTCTGGAAGCATACATCACAAATGCTAAACGGCTCTTGGCTGATTCTAAGGCTGGCAGAAACCCTTTCGATGGCTTCACACCTTCCGTTCCAACGGGTGAGACTTTGGCGTTTGGTGATGAGAACTACATCAAATTTGAGGAAGCAGGTGTACTTGAAGCTCGGAAAGCTGCGTTTGTTCTTGTTGCCGGTGGTCTTGGCGAGCGTTTAGGATACAGTGGGATTAAGCTTGCGCTTCCTGCAGAAACCACTACCAGAACATGTTTCGTACAGAATTACATTGAATCTATATTGGCTCTTCAAGAAGCCAGCTCGCAAGGTGAATCCCAGACACAGATTCCTCTTGTTATTATGACTTCTGATGATACCCATGGACGTACTTTAGAGCTATTAGAATCAAATTCTTATTTTGGTATGCAACCCACGCAAGTAACACTTTTAAAGCAGGAAAAAGTTGCATGCTTAGAAGATAATGATGCCAGGCTTGCATTGGAACCACAAAACAAGTACAAAATTCAGACAAAACCTCATGGACATGGTGATGTGCATGCACTTCTTTATTCAAGTGGCATTCTGAAAGTATGGTATGAAGCTGGGTTGAAATGGGTTCTATTTTTTCAAGATACAAATGGGCTTCTCTTCAAGGCAATTCCATCAGCACTGGGCGTCAGTGCTGCCAAACAGTACCATGTTAACTCTCTTGCAGTACCTCGAAAAGCAAAAGAAGCTATTGGTGGAATTACCAGACTCACTCACTCTGATGGGAGGTCTATGGTGATAAATGTGGAATACAATCAGCTAGATCCTCTTCTTAGAGCAAGTGGATACCCTGACGGCGACGTAAATTGTGAGACTGGCTACTCCCCATTTCCAGGAAATATTAACCAATTGATTTTAGAACTTGGTCATTACATTGAAGAGCTCTCAAAAACAGGAGGTGCCATTCAGGAGTTTGTTAACCCAAAATATAAAGATGCCAGCAAAACTTCATTTAAGTCCTCAACTCGACTTGAATGTATGATGCAAGACTATCCAAAAACATTGCCCCCATCTGCCAGGGTTGGATTCACGGTGATGGAAACGTGGCTTGCTTATGCACCTGTGAAGAATAATGCCGAGGATGCTGCCAAGGTGCCGAAAGGAAATCCATACCATAGTGCAACTTCTGGAGAAATGGCCATCTATCGTGCAAATAGCATTATTCTCAGAAAGGCTGGTGTCCAAGTAGCAGATCCAGTAGTGCAGGTCTTCAATGGGCAAGAGGTTGAAGTTTGGCCTCGTATCACATGGAAGCCAAAATGGGGTCTGACTTTTAATCGAATCAAGAGCAAAGTCAGTGGAAATTGCTCCATTTCCCTAAGGTCAACTCTGGCCATTAAGGGTCCAAATATTTTTATTGAAAATCTGTCCGTAGATGGGGCTCTAATCATTGATGCTGTGGATGATGCAGAGGTAAATGTGAGTGGTTCAGTTCAAAACAATGGTTGGGTCCTTGAGACCGTTGACTACAAAGATGCCTCGGAGCCTGAGGTATTGAGAATCCGGGGTTTTAAATTTAACAAAATTGAGCAGCTGGAAACGAAATACTCTGAGCCTGGCAAATTTCACTTGAAGGCTTGA 1803 0.4343 MASSLGDNFNLLSPQQQELVKMLLDNGQEHLFRDWPAPGVDDDHKNAFFDQLTRLDSSYPGGLEAYITNAKRLLADSKAGRNPFDGFTPSVPTGETLAFGDENYIKFEEAGVLEARKAAFVLVAGGLGERLGYSGIKLALPAETTTRTCFVQNYIESILALQEASSQGESQTQIPLVIMTSDDTHGRTLELLESNSYFGMQPTQVTLLKQEKVACLEDNDARLALEPQNKYKIQTKPHGHGDVHALLYSSGILKVWYEAGLKWVLFFQDTNGLLFKAIPSALGVSAAKQYHVNSLAVPRKAKEAIGGITRLTHSDGRSMVINVEYNQLDPLLRASGYPDGDVNCETGYSPFPGNINQLILELGHYIEELSKTGGAIQEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSARVGFTVMETWLAYAPVKNNAEDAAKVPKGNPYHSATSGEMAIYRANSIILRKAGVQVADPVVQVFNGQEVEVWPRITWKPKWGLTFNRIKSKVSGNCSISLRSTLAIKGPNIFIENLSVDGALIIDAVDDAEVNVSGSVQNNGWVLETVDYKDASEPEVLRIRGFKFNKIEQLETKYSEPGKFHLKA 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02340 600 PANTHER UDP-SUGAR PYROPHOSPHORYLASE 4 577 - -
Gma04g02340 600 Pfam UTP--glucose-1-phosphate uridylyltransferase 115 264 IPR002618 GO:0070569
Gma04g02340 600 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 13 467 IPR029044 -
Gma04g02340 600 Gene3D - 468 588 - -
Gma04g02340 600 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 4 577 IPR039741 -
Gma04g02340 600 SUPERFAMILY Nucleotide-diphospho-sugar transferases 17 540 IPR029044 -
Gma04g02340 600 CDD UGGPase 118 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02340 Gma-Chr4 53822322 53830253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02340 K12447 - gmx:778158 1205.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02340 04 53822322 53830253 Gma04g02340 04 53822322 53830253 ECH
Gma04g02340 04 53822322 53830253 Gma06g01058 06 9903863 9911928 GST