Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02321 ATGACATCCTGGTTATTGGGAAGGTCTAGTAGGATCTTAATTCATCAACAACAACACCTTCACAAGGGACCATTTCTTAACTATAATAGCTCTTGTTCCTCTTTTCGATCAACTGAGCCATTTAGGTGCCGTGATGCATTACCGGGTAAGAACTCGTCACCTACCCTTTTCCGCTTTTGGCGTCATGAATCAACCAAAGCTGAGGCACAATTGGAATTGGAGCAAGATGTCACCGAGGATGACCCTAAACAGGTTGGCAAGGAAATGGGTGTGAAGATGTATTCTGACATGGTCACTCTTCAAACTATGGACAGCATATTCTATGAAGTGCAGAGGCAAGGTAGAATTTCCTTCTACCTCACCCAAATGGGGGAAGAAGCAGTTAACATTGCATCTGCTGCTGCACTTTCTCCTGATGACATCATATTGCCTCAGTACCGAGAGCCTGGAGTTCTATTGTGGCGTGGTTTTACACTGCAGCAATTTGTTCATCAGTGCTTTGGAAACACACATGATTTTGGAAAAGGCAGGCAGATGCCTATACATTATGGTTCTAACAAGCACAATTACTTCACAGTGTCATCCCCCATTGCAACACAACTTCCTCAAGCTGTGGGGGCTGCTTATTCCCTTAAAATGGATGGGAAAAGTGCATGTGCAGTCACTTTTTGTGGGGATGGTGCCACCAGTGAGGGAGATTTTCATGCTGCTATGAATTTTGCAGCAGTCATGGAGGCCCCTGTTGTTTTTATCTGTCGTAATAATGGATGGGCCATCAGTACACCTGTAGAAGACCAATTTCGAAGCGATGGTATTGTAGTTAAAGGTAAAGCTTATGGCATCTGGAGTATCAGAGTAGATGGAAATGATGCTCTTGCTGTTTATAGTGCAGTACACACTGCTAGAGAAATCGCTATAAGAGAAAAAAGGCCTGTTTTAATTGAGGCTCTCACTTATAGAGTAGGACATCACTCTACATCTGATGATTCAACTAAGTACCGGGGAACCGGTGAGATTGAATATTGGAAGACGGCAAGGAATCCTGTGAATCGATTCAAAAGATGGGTAGAAAGGAATGATTGGTGGAGTGACAAGGATGAATTGGAGCTTAGAAGCAGTGTTAGGAAGCAGTTAATGCATGCGATTCAGGTGGCAGAGAAAGCACAAAAACCTCCACTTGAGGACTTATTTAGTGATGTCTATGATCAATTGCCATCAAACCTTCAGGAGCAAGAGAGACTACTTAGAAAGACCATCCAGAAGCATCCCAAAGACTACCCTTCTGATGTTCCTTTGTAG 1299 0.4342 MTSWLLGRSSRILIHQQQHLHKGPFLNYNSSCSSFRSTEPFRCRDALPGKNSSPTLFRFWRHESTKAEAQLELEQDVTEDDPKQVGKEMGVKMYSDMVTLQTMDSIFYEVQRQGRISFYLTQMGEEAVNIASAAALSPDDIILPQYREPGVLLWRGFTLQQFVHQCFGNTHDFGKGRQMPIHYGSNKHNYFTVSSPIATQLPQAVGAAYSLKMDGKSACAVTFCGDGATSEGDFHAAMNFAAVMEAPVVFICRNNGWAISTPVEDQFRSDGIVVKGKAYGIWSIRVDGNDALAVYSAVHTAREIAIREKRPVLIEALTYRVGHHSTSDDSTKYRGTGEIEYWKTARNPVNRFKRWVERNDWWSDKDELELRSSVRKQLMHAIQVAEKAQKPPLEDLFSDVYDQLPSNLQEQERLLRKTIQKHPKDYPSDVPL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02321 432 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 76 432 - -
Gma04g02321 432 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 76 432 - -
Gma04g02321 432 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 79 427 IPR029061 -
Gma04g02321 432 Gene3D - 53 415 - -
Gma04g02321 432 Pfam Dehydrogenase E1 component 97 392 IPR001017 GO:0016624
Gma04g02321 432 CDD TPP_E1_PDC_ADC_BCADC 93 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02321 Gma-Chr4 53667565 53673558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02321 75 270 Acyl Lipid Metabolism Gene Families AT5G09300 76.531 3.24e-111 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02321 K00166 - gmx:100789693 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02321 04 53667565 53673558 Gma04g02321 04 53667565 53673558 ECH