Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02305 ATGGCATCAGCCTTGTCCACGACCAGTGTGCTTTGCTGGAGGAATCCTCAGCACATGCATATTATCTCACCCTCTTCACAGACACTTCAAAATGGAACTCTAAGAACTGTAGCTGCTTCAGCCTCAAAAGATATCAGCATAGAAAGTGACAAGTGTTCCTCTTTGTTGGTGAACAGAAGAACAATTTTGGCTTCTGGGGTTTCCTTGTTGTCTTTCCCGGGTGAGAGTTTGGCTGTGGTGAAACAAGGCCTTCTAGCAGGGAGAATTCCTGGCCTGTCCGAGCCAGATGAACAAGGTTGGAGGACCTATCGCAGGCCGGATGAGAAGTCAGGAGGACATGGTGTTGGATGGAGTCCTATTATTCCATACAGCTTCAGAGTGCCTGAAGAATGGGAAGAGGTACCAGTATCAATAGCAGATCTTGGTGGCACAGAGATAGATTTGAGATTTGCCAGCTCTAAGGAAGGACGTTTGTTTGTCATTGTTGCTCCTGTTCTTAGATTCTCCGATGATCTTGGTGACAATGCTACAATAGAAAAAATTGGACCTCCAGAGAAAGTGATCAATGCATTTGGTCCAGAAATGATTGGGGAAAATGTAGAAGGGAAGGTTCTGAGCGTTAGTGCAGCAGAACATGAAGGAAGAACTTACTACCAGTTTGAGCTAGAGCCTCCCCATATTTTCATTACTGCCACTGCAGCTGGCAACCGCTTATATTTGTTTGGAGTAACAGGCAGCGgtcttcagtggaagagacactacaatgatttgaagaagatagctgaatctttccgggttgtataa 804 0.4216 MASALSTTSVLCWRNPQHMHIISPSSQTLQNGTLRTVAASASKDISIESDKCSSLLVNRRTILASGVSLLSFPGESLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYSFRVPEEWEEVPVSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFSDDLGDNATIEKIGPPEKVINAFGPEMIGENVEGKVLSVSAAEHEGRTYYQFELEPPHIFITATAAGNRLYLFGVTGSGLQWKRHYNDLKKIAESFRVV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02305 267 Pfam PsbP 123 266 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Gma04g02305 267 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 120 267 - -
Gma04g02305 267 PANTHER - 16 267 - -
Gma04g02305 267 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 16 267 - -
Gma04g02305 267 SUPERFAMILY Mog1p/PsbP-like 115 266 IPR016123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02305 Gma-Chr4 53479520 53481380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02305 - - gmx:100785447 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02305 04 53479520 53481380 Gma04g02305 04 53479520 53481380 ECH
Gma04g02305 04 53479520 53481380 Gma06g01091 06 10266536 10268396 GST