Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02304 ATGAGTCGCCGTGGCATGGACGACGACGACGAGGAGGAATacgaggagcaggacgagcaggtcgccgacttcgacgaggaggaggacgagcaggtcgccgacttcgtcgaggaggaggaGGAGGGCAGCCACCGAGGACGCGGCGGCGGTGGCGGCAGGAAGAGGGGAAGATCTGGCTTTATCGATGACGACGCCGAGGAGGTCGACGAGGACGAGGAGGAGGAGGACGACGATGACGAGGATTTCGATGGCCGGGGTGGCGGTGGCGGTCGGAGGCGCCAGTACAAGAAGGTTTCCGCCTCTAATTTCTTCGATGAAGAGGCCGTGGTGGATAGTGATGAGGAAGAGGAGGAAGAAGAGGGAGAAGACGACTTCATTGTTGAGGGTGGATCTGATCTGCCGGAAGAAGATGATGGGAGAAGGATGCGTAGTAGCCGTATGCTGCCACATCACCAAGAGGATCATGAAGATCTTGAAGCTATGGCCAGAAGCATCCAGGAACGTTATGGAAGGCGCCTAACAGATTACGATGAAGAAACGACAGATGTGGAGCAACAAGCTCTTTTGCCATCTGTGAGAGATCCAAAGCTGTGGATGGTCAAATGTGCAATTGGTCGTGAGAGAGAAACAGCTGTTTGCCTCATGCAAAAGTACATAGATAAGGGGTCTGAGTTGCAAATAAGATCAGCTATTGCTCTCGATCATCTCAAAAACTATATATACGTGGAAGCAGATAAAGAAGCCCATGTCAGAGAGGCTTGCAAAGGTCTGCGCAATATATTTGGCCAAAAAATAACACTTGTTCCAATCAGAGAAATGACTGATGTTTTGTCTGTTGAAAGTAAAGCTATTGATCTTGCTAGAGATACTTGGGTCAGATTGAAGATCGGGACATATAAAGGGGACCTTGCCAAAGTAGTGGATGTTGATAACGTGCGGCAGAGGGTTACTGTCAAATTAATTCCAAGGATAGACTTACAGGCTCTTGCAAACAAATTGGAAGGTAGAGAAGTTGTGAAAAAGAAGGCTTTTGTTCCTCCTCCTCGTTTTATGAATGTTGATGAAGCAAGGGAACTGCATATCCGTGTGGAGCATAGACGCGATGCCTATGGGGAACGATTTGATGCAATTGGAGGCATGATGTTCAAAGATGGATTCTTATACAAAACTGTATCGATAAAATCCATTAGTGCTCAGAACATCAAACCTACTTTTGATGAGCTTGAAAAATTTCGTAAACCAGGCGAAAGTGGAGATGGTGACGTAGCTAGTCTGTCAACTTTGTTTGCAAACAGGAAGAAAGGCCATTTTATGAAAGGAGATGCTGTTATTGTTGTTAAGGGTGATTTAAAGAACTTGAAGGGGAAGGTGGAGAAAGTTGATGAAGATAATGTTCATATAAGACCAGAAATGGAGGATCTTCCAAAAACTATTGCTGTAAATGAAAAGGAACTTTGTAAATATTTTGAACCTGGAAACCACGTTAAGGTAGTTTCTGGTGCTCAAGAGGGGGCTACAGGCATGGTTGTGAAGGTCGAGCAGCATGTGTTGATCTTAATATCTGATACAACAAAAGAGCATATCCGTGTCTTTGCAGATGATGTTGTAGAAAGTTCAGAAGTAACCACTGGAGTTACAAGAATTGGGGACTATGAACTTCGTGATCTTGTATTGCTAGATAATAATAGCTTTGGTGTGATAATACGTGTTGAAAGTGAGGCATTTCAGGTTCTTAAGGGGATTCCTGACAGACCTGAAGTTGTGCTTGTTAAATTAAGAGAGATCAAATGTAAGATAGATAAGAAAATAAGTGTGCAGGATAGGTTTAAGAATACGGTATCGTCAAAGGATGTTGTGCGGATCATTGATGGTCCCTGCAAAGGAAAGCAAGGTCCTGTGGAGCACATATATAGAGGAATCTTGTTCATCTTTGATCGCCATCATCTTGAACATGCAGGCTTTATATGTGCTAAGGCCCAATCATGTGTAGTTGTGGGAGGTTCACGCTCCAGTGGTGACAGAAATGGGGATGCCTACTCAAGATTTGCCAGTCTTAGAAGTCCAAGTCGTATTCCACCGTCCCCGAGGAGGTTTTCTCGAGGAGGGTCAATGGATTCTGGAGGGAGACATAGGGGTGGAAGGGGCCATGATAGTTTGGCTGGGACAACCGTTAAAGTACGCCAAGGTCCCTATAAAGGTTACCGTGGGCGTGTTATAGATGTTAAAGGCACAACAGTTCGTGTTGAGTTGGAATCCCAAATGAAGGTTGTGACAGTTGACCGGAACCATATATCTGACAATGTGGCTGTAACCCCATATCGTGATACATCTCGCTATGGAATGGGAAGTGAAACACCAATGCATCCTTCTCGAACTCCCTTACATCCATATATGACTCCAATGAGAGATCCTGGAGCAACACCTATTCATGATGGAATGAGAACACCTATGCGTGACCCAGCATGGAATCCTTATACTCCAATGAGTCCTCCAAGGGATAACTGGGAAGATGGAAATCCAGGCTCTTGGGCAGCCAGTCCACAGTATCAGCCTGGAAGCCCTCCTTCACGGCCATATGAAGCCCCAACTCCTGGTGCTGGTTGGGCTAGCACTCCTGGTGGAAATTATAGTGAAGCTGGAACACCGCGGGACAGTTCTGCCTATGCCAATGCTCCAAGCCCATATTTACCATCAACACCTGGTGGACAGCCTATGACACCGAGTTCAGCATCTTATCTTCCTGGCACCCCTGGAGGACAGCCTATGACTCCAGGCACAGGTGGTATGGACATGATGTCTCCAGTTTTAGGTGGGGAAAACGAAGGGCCTTGGTTTATCCCAGATATATTGGTCAACGTACACAGGGCTGGAGAGGAATCTGTTGGAGTTATAAGAGAGGTTCTCCCGGATGGCTCTTACAGGGTAGCTCTTGGATCTAGTGGCAATGGTGAAGCGATTACAGCCCTTCCTAATGAAATGGAGGCTGTGGTACCAAGAAAATCAGACAAAATAAAGATTATGGGTGGGGCATTGCGTGGTGCCACCGGCAAATTGATTGGTGTAGATGGTACTGATGGAATTGTAAAGGTAGATGACACATTGGATGTGAAGATTTTAGACTTAGTTATTTTGGCAAAATTAGCTCAACCATGA 3153 0.4453 MSRRGMDDDDEEEYEEQDEQVADFDEEEDEQVADFVEEEEEGSHRGRGGGGGRKRGRSGFIDDDAEEVDEDEEEEDDDDEDFDGRGGGGGRRRQYKKVSASNFFDEEAVVDSDEEEEEEEGEDDFIVEGGSDLPEEDDGRRMRSSRMLPHHQEDHEDLEAMARSIQERYGRRLTDYDEETTDVEQQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRSAIALDHLKNYIYVEADKEAHVREACKGLRNIFGQKITLVPIREMTDVLSVESKAIDLARDTWVRLKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVVKKKAFVPPPRFMNVDEARELHIRVEHRRDAYGERFDAIGGMMFKDGFLYKTVSIKSISAQNIKPTFDELEKFRKPGESGDGDVASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGKVEKVDEDNVHIRPEMEDLPKTIAVNEKELCKYFEPGNHVKVVSGAQEGATGMVVKVEQHVLILISDTTKEHIRVFADDVVESSEVTTGVTRIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGIPDRPEVVLVKLREIKCKIDKKISVQDRFKNTVSSKDVVRIIDGPCKGKQGPVEHIYRGILFIFDRHHLEHAGFICAKAQSCVVVGGSRSSGDRNGDAYSRFASLRSPSRIPPSPRRFSRGGSMDSGGRHRGGRGHDSLAGTTVKVRQGPYKGYRGRVIDVKGTTVRVELESQMKVVTVDRNHISDNVAVTPYRDTSRYGMGSETPMHPSRTPLHPYMTPMRDPGATPIHDGMRTPMRDPAWNPYTPMSPPRDNWEDGNPGSWAASPQYQPGSPPSRPYEAPTPGAGWASTPGGNYSEAGTPRDSSAYANAPSPYLPSTPGGQPMTPSSASYLPGTPGGQPMTPGTGGMDMMSPVLGGENEGPWFIPDILVNVHRAGEESVGVIREVLPDGSYRVALGSSGNGEAITALPNEMEAVVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDDTLDVKILDLVILAKLAQP 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02304 1050 SUPERFAMILY Translation proteins SH3-like domain 480 539 IPR008991 -
Gma04g02304 1050 MobiDBLite consensus disorder prediction 63 83 - -
Gma04g02304 1050 Pfam Early transcription elongation factor of RNA pol II, NGN section 196 277 IPR005100 -
Gma04g02304 1050 CDD KOW_Spt5_5 717 765 IPR041978 -
Gma04g02304 1050 Gene3D - 285 327 IPR014722 -
Gma04g02304 1050 MobiDBLite consensus disorder prediction 8 37 - -
Gma04g02304 1050 Gene3D - 176 278 IPR036735 GO:0006355
Gma04g02304 1050 PIRSF Spt5 1 1050 IPR017071 GO:0006357|GO:0032784
Gma04g02304 1050 MobiDBLite consensus disorder prediction 668 721 - -
Gma04g02304 1050 PANTHER SUPPRESSOR OF TY 5 37 1048 IPR039659 GO:0006357|GO:0032784
Gma04g02304 1050 Gene3D - 431 488 IPR014722 -
Gma04g02304 1050 CDD NGN_Euk 196 278 IPR039385 -
Gma04g02304 1050 Pfam KOW motif 491 516 IPR005824 -
Gma04g02304 1050 Pfam KOW motif 721 751 IPR005824 -
Gma04g02304 1050 Gene3D - 700 767 IPR014722 -
Gma04g02304 1050 MobiDBLite consensus disorder prediction 902 916 - -
Gma04g02304 1050 SMART kow_9 612 639 IPR005824 -
Gma04g02304 1050 SMART kow_9 488 515 IPR005824 -
Gma04g02304 1050 SMART kow_9 436 463 IPR005824 -
Gma04g02304 1050 SMART kow_9 997 1024 IPR005824 -
Gma04g02304 1050 SMART kow_9 285 312 IPR005824 -
Gma04g02304 1050 SMART kow_9 717 744 IPR005824 -
Gma04g02304 1050 MobiDBLite consensus disorder prediction 1 140 - -
Gma04g02304 1050 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT5 37 1048 - -
Gma04g02304 1050 MobiDBLite consensus disorder prediction 107 132 - -
Gma04g02304 1050 CDD KOW_Spt5_6 991 1048 IPR041980 -
Gma04g02304 1050 MobiDBLite consensus disorder prediction 775 928 - -
Gma04g02304 1050 SUPERFAMILY Translation proteins SH3-like domain 429 467 IPR008991 -
Gma04g02304 1050 CDD KOW_Spt5_2 437 487 IPR041975 -
Gma04g02304 1050 CDD KOW_Spt5_3 488 538 IPR041976 -
Gma04g02304 1050 Gene3D - 491 540 IPR014722 -
Gma04g02304 1050 SMART nusgn_4 194 280 IPR006645 GO:0140673
Gma04g02304 1050 Pfam Spt5 transcription elongation factor, acidic N-terminal 103 190 IPR022581 -
Gma04g02304 1050 CDD KOW_Spt5_1 289 326 IPR041973 -
Gma04g02304 1050 ProSitePatterns Ribosomal protein L24 signature. 440 457 IPR005825 GO:0003735|GO:0005840|GO:0006412
Gma04g02304 1050 CDD KOW_Spt5_4 616 658 IPR041977 -
Gma04g02304 1050 MobiDBLite consensus disorder prediction 874 893 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02304 Gma-Chr4 53467000 53476510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02304 K15172 - gmx:100784916 1842.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02304 04 53467000 53476510 Gma06g01092 06 10272453 10281104 GST