Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02294 ATGAAGAGGAGCAGAGATATGGAGAAGAGATCAGAGATAAATTCTGCAATTGAAGAGTTGTCTATGCTGGTTATAGTCAAACCTGAAGGAAATCATAAGATTGCACACATCCCCACAAAGCCTTTCCTATCTCTATGTTACTTGGTTCTACAAGTTATTGATAAGATAGGACCAACCATGGCTGTTTTGAGACAAGACGTTTCCCAGAATATTAAGAGGTTGGAAGTGATGCATGAATTGAATCCCTCGATGAATTCAAATTTGGTTGAAATATTGAAATCAGAAGCTACCAAAGGCAAAGCAAGGAAGAGGTCTAGTTGTAGTAAAGCCTTTCTTTGGCTCACTAGGTCCCTGGATTTCTCCTCAGCATTGTTACAATCACTAGAAAACGATCCTAAAAAGGATTTGGAGCAAATAATTCAAGAATGTTATGATGCAACCTTGTCACCATGGCATGGATGGATTTCGTCAGCTGCTTTCAGAGTGGCTAAAAAACTAGTGCCAGATAGTAAAACTTTGATGGATCTCCTCAAGGAAAAAGATGAAAACTGTGAAACCCTAAAGGAGAAAATGCAGATCTTGGTTTCCTTGCTTGTGCCATTTCTTGAGGATGTTCATTGTATTCTTAAAATTTATAACTTGGACAGGATTAAGTCAACCTGA 663 0.3831 MKRSRDMEKRSEINSAIEELSMLVIVKPEGNHKIAHIPTKPFLSLCYLVLQVIDKIGPTMAVLRQDVSQNIKRLEVMHELNPSMNSNLVEILKSEATKGKARKRSSCSKAFLWLTRSLDFSSALLQSLENDPKKDLEQIIQECYDATLSPWHGWISSAAFRVAKKLVPDSKTLMDLLKEKDENCETLKEKMQILVSLLVPFLEDVHCILKIYNLDRIKST 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02294 220 Coils Coil 170 197 - -
Gma04g02294 220 Gene3D Glycolipid transfer protein 1 216 IPR036497 -
Gma04g02294 220 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 4 217 - -
Gma04g02294 220 Pfam Glycolipid transfer protein (GLTP) 37 178 IPR014830 GO:0005737|GO:0120009|GO:0120013
Gma04g02294 220 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 4 217 - -
Gma04g02294 220 SUPERFAMILY Glycolipid transfer protein, GLTP 36 216 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02294 Gma-Chr4 53394415 53396854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02294 - - gmx:100527808 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02294 04 53394415 53396854 Gma04g02294 04 53394415 53396854 ECH
Gma04g02294 04 53394415 53396854 Gma06g01107 06 10368939 10371024 GST