Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02288 ATGCAGATCAGGGGATCGAGTCACAGACTCTCCAGTATGGGCAATAATCGATCCCGCATTCCCGCGCTCCTCATCTCCATGTTCGCCACTTTCGCTTCTATCTACGTCGCTGGAAGGCTGTGGCAGGACGCAGAGAATCGCGTTTATCTCATCAAAGAGCTCGATAGGATCACTGGCCAGGGACAATCTGCTATATCTGTGGATGATACATTGAAGATCATAGCCTGCAGGGAACAACATAAGAAGCTCGATGCAATTGAGACGGAACTTGCTGGAGCTAGACAAGAGGGTTTTGTTTCAAAACCCTTGATAGAGACTAATGGAACTTACTCAATGAGAAGGCCGTTGGTCGTGATAGGTATACTGACAAAGTTTGGTCGCCAGAAGAATAGAGATGCAATTCGAAAGGCATGGATGGGGAGTGGTGCATCTTTGAAAAAAATTGAAGAAGGAAAGGGCATCATTGTGCAATTTGTTATTGGTAGAAGTGAAAATCGTGGAGACAATCAAGATAAAGACATTGATCGTGAGAATAGGCTGACTAATGACTTCATAATTCTCGATAatcatgtggaaacaaatgatgcattcccaaagaaggccaaattgttctttgctcatgctgcagacaaatgggatgctgagttttatgcgaaagtcaatgatgatgtctatgtaaatattgATGCCTTGGGAGCTACACTAGCTACTCATTTGGACaaacctcgtgtttacatgggatgcatgaaatcaggggaagttttctctGAGCTGAACCATAAATGGTATGAACCAGAGTGGTGGAAATTTGGTGACAAAAAATCATACTTTCGTCATGCATCAGGAGAGATGTATGTTATATCACAAGCTTTGGCTAAATTTATATCAATAAACAGATCTATTCTCCGTACCTATGCCCACGATGATGTGAGTGCTGGATCCTGGTTTATCGGGCTTGATGTGAAGCATGTTGATGAGGCCAAGTTTTGTTGCTCATCTTGGTCGACAGGAGCAATCTGTGCTGGTGTTTGA 1032 0.3672 MQIRGSSHRLSSMGNNRSRIPALLISMFATFASIYVAGRLWQDAENRVYLIKELDRITGQGQSAISVDDTLKIIACREQHKKLDAIETELAGARQEGFVSKPLIETNGTYSMRRPLVVIGILTKFGRQKNRDAIRKAWMGSGASLKKIEEGKGIIVQFVIGRSENRGDNQDKDIDRENRLTNDFIILDNHVETNDAFPKKAKLFFAHAADKWDAEFYAKVNDDVYVNIDALGATLATHLDKPRVYMGCMKSGEVFSELNHKWYEPEWWKFGDKKSYFRHASGEMYVISQALAKFISINRSILRTYAHDDVSAGSWFIGLDVKHVDEAKFCCSSWSTGAICAGV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02288 343 Coils Coil 76 96 - -
Gma04g02288 343 Gene3D - 107 335 - -
Gma04g02288 343 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT1 1 337 - -
Gma04g02288 343 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 337 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma04g02288 343 Pfam Galactosyltransferase 130 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02288 Gma-Chr4 53334585 53339283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02288 23 343 Glycosyltransferase AT5G53340 71.963 6.94e-178 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02288 K20854 - gmx:100779561 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02288 04 53334585 53339283 Gma06g01113 06 10422031 10427570 GST