Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02280 ATGGCGGATTCAGAGCGAATCCAAAATTCGTGGATGGCTTCGGATCAAACTGCAATTGAAATGAGCGGCGAGGGCACAGGTTCCAGGGAATGCTCTTCTCTCCCTCCGCCGCCGCAAAAACCATTCAATTCTGATCAATTGGGAATCGGAGAACGAGCTTTCTCCGCCGCCGGCGCCGCCTTCCTCTCCGCCATCATTGTCAATCCCCTCGACGTTGCCAAGACAAGGTTGCAAGCACAAGCGGCAGGGGTCGCATATTCTCATCCACTCAGTAATATGACCAGTAGAATGGCTTGTTTTGGGCCAAATATGATATTTGCTGATTTAAAATGTTCTCCATCATGCCACCGGGCTGGATTCCAGGGCACAGTGTCCATTTGTCCTCCCGAGTGTTTTCGCTACAAAGGAACACTAGATGTTATCTACAAAATTATAAAACAGGAGGGAATTTCTAGGCTATGGAGAGGCACAAATGCTGGCCTGGCTCTTGCAGTACCAACTGTGGGAATATACCTTCCTTGCTATGACATACTCCGCAATTGGTTGGAGGAATTCACAGCTAAAAAGGCACCAACCACAACTACTTATGTACCTCTAGTAGCTGGTTCATTGGCACGCTCTCTAGCTTGCACTACTTGCTACCCTATTGAACTTGCTAAAACTCGTATGCAGGCATTTAAAGAGACTCAAATTGGTAAAAAGCCTCCTGGAGTGATCCAGACTCTGCTAGGTGTTGTTTCAAATGTCAAGAGCACAAACACTCCACAGAACAGCTTGCAAGGTTATCGTGTTTTGTGGACTGGCATGGGAGCTCAACTTGCCCGTGATGTACCCTTCTCTGCTATTTGTTGGTCGACACTTGAACCGACTAGAAGAAAACTTCTTGGTTTGATTGGAGGTGATGATGCCAATGCATTGAGTGTTCTTGGGGCAAATTTTGGAGCTGGGTTTGTTGCAGGAACCTTAGCAGCTGGAGCCACATGTCCGCTAGATGTTGTAAAAACTCGAAGGCAGATAGAGAGGGATCCTGTTAGGGCATTGAAAATGACTACAAGACAGACACTGATGGAGGTGTGGAGAGATGGAGGCTTGAAAGGATTGTTTACAGGTGTTGGTCCACGAGTTGGTCGAGCAGGCCCCTCTGTTGGAATTGTGATTTCATTTTATGAAGTTGTAAAGTTTGTTCTACATCATCAGTACACATAA 1206 0.4668 MADSERIQNSWMASDQTAIEMSGEGTGSRECSSLPPPPQKPFNSDQLGIGERAFSAAGAAFLSAIIVNPLDVAKTRLQAQAAGVAYSHPLSNMTSRMACFGPNMIFADLKCSPSCHRAGFQGTVSICPPECFRYKGTLDVIYKIIKQEGISRLWRGTNAGLALAVPTVGIYLPCYDILRNWLEEFTAKKAPTTTTYVPLVAGSLARSLACTTCYPIELAKTRMQAFKETQIGKKPPGVIQTLLGVVSNVKSTNTPQNSLQGYRVLWTGMGAQLARDVPFSAICWSTLEPTRRKLLGLIGGDDANALSVLGANFGAGFVAGTLAAGATCPLDVVKTRRQIERDPVRALKMTTRQTLMEVWRDGGLKGLFTGVGPRVGRAGPSVGIVISFYEVVKFVLHHQYT 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02280 401 Gene3D Mitochondrial carrier domain 116 400 IPR023395 -
Gma04g02280 401 MobiDBLite consensus disorder prediction 1 46 - -
Gma04g02280 401 PANTHER FI19922P1-RELATED 44 400 IPR045315 GO:1990542
Gma04g02280 401 PANTHER BNACNNG35730D PROTEIN 44 400 - -
Gma04g02280 401 ProSiteProfiles Solute carrier (Solcar) repeat profile. 307 395 IPR018108 -
Gma04g02280 401 Pfam Mitochondrial carrier protein 194 294 IPR018108 -
Gma04g02280 401 Pfam Mitochondrial carrier protein 47 182 IPR018108 -
Gma04g02280 401 Pfam Mitochondrial carrier protein 311 397 IPR018108 -
Gma04g02280 401 ProSiteProfiles Solute carrier (Solcar) repeat profile. 47 181 IPR018108 -
Gma04g02280 401 Gene3D Mitochondrial carrier domain 32 99 IPR023395 -
Gma04g02280 401 MobiDBLite consensus disorder prediction 1 33 - -
Gma04g02280 401 SUPERFAMILY Mitochondrial carrier 50 391 IPR023395 -
Gma04g02280 401 ProSiteProfiles Solute carrier (Solcar) repeat profile. 193 293 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02280 Gma-Chr4 53271244 53276089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02280 143 394 Organic Solute Cotransporters AT3G55640 26.357 1.29e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02280 K15119 - gmx:100778501 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02280 04 53271244 53276089 Gma06g01120 06 10496991 10502830 GST