Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02060 ATGGTAAGCAGAGTCTCGTACAGGTCCAGCAGCCTCTTGACTGGTAGATTTCATGCTAGAAAGCTATCTCCTAGCATTATCACTTTCTACACCATGTTCATATTTTCTTTCTCCGTCTTCGTCTTGTTCTACGTGAGACACATCAGTGTTGATGAAGATCCACCACACCCTCTGCTTTCTCAACAATCTAAATCTCACCAGGTGCCAGAGTTACCTGTGCACTATAAGCAACTTTGGGATACTCTGTTCAATCATGGCTTACACCAATGTGTCAAGCCGACTACTAAATATAAAGCTGCCCAAGGATTTGATCGCTACCTAACTGTGAGAAGTAATGGTGGACTAAATCAAATGCGCACTGGTATATCAGACATGGTGGCTGTGGCACATATAATGAATGCAACTTTAGTCATACCTCAATTGGATAAACGCTCATTCTGGAAAGACTCTAGTGTATTTTCAGATGTATTTGATGAGTTTCATTTCATCGAATCCCTGAAAGGAGATATCAGGATTGTTAGTGAGCTTCCCAAAAACTTGGAAGGTGTCCCCCGGGCCAGGAAACACTTTACTTCCTGGTCTGGAGTCAGTTACTATGAAGAGATGACAAGATTATGGAGTGACTATCAGGTGATACATGTTGCAAAATCAGATTCTCGACTGGCAAACAATGATCTTCCTCTGGACATACAGAGGTTGAGATGCCGTGCGATGTATCATGCACTTCGATTTTCTCCTCCTATAGAGAATTTAGGAAAGAGGTTGGTGGATCGGCTGAGATCACACGGAGGAAGATATATTGCTCTCCATCTGAGATATGAGAAAGATATGCTTTCTTTTACTGGTTGTGCATATGGTCTGACAGATGCAGAATCTGAAGAGCTTAGAATTTTGAGGGAGAATACAAATTATTGGAAAGTAAAAAAGATAAATTCAACAGAACAGAGAGTTGGAGGATTTTGTCCACTGACTCCAAAGGAGGTGGGCATTTTTCTTCATGCTCTTGGGTATCCCCCATCTACACCAATATACATTGCAGCAGGAGAGATCTATGGTGGTAATACTCATCTTTCGGAGCTCTCATCCCGCTACCCTAATCTAATCTTTAAGGAATCCCTTGCAACTCCTGAAGAGCTGAAAGATTTTGCCAATCACGCTTCCCAAACTGCTGCACTTGATTACATAATCTGTGTAGAGAGTGATGTATTTGTTCCATCATATTCAGGAAATATGGCAAGAGCAGTTGAGGGGCACCGCAGATTCTTAGGTCACCGCAAGACAATCAACCCAGACAGGAAAGGACTTGTTGGAATTTTTTATATGCTGGAAACTGGAGAGCTAGAAGAAGGAAGGGAACTATCAAATATGGTGCAGCGGATGCACAAGAACAGGCAAGGAGCTCCAAGGAAAAGGCACGGTTCTCTACCGGGAATTAAAGGCCGAGCACGATTTAGGACTGAAGAGCCCTTTTATGAAAATCCATATCCTGAGTGTATATGTGGTTCTAAAAGCAAACTTGATATAACATGA 1530 0.4222 MVSRVSYRSSSLLTGRFHARKLSPSIITFYTMFIFSFSVFVLFYVRHISVDEDPPHPLLSQQSKSHQVPELPVHYKQLWDTLFNHGLHQCVKPTTKYKAAQGFDRYLTVRSNGGLNQMRTGISDMVAVAHIMNATLVIPQLDKRSFWKDSSVFSDVFDEFHFIESLKGDIRIVSELPKNLEGVPRARKHFTSWSGVSYYEEMTRLWSDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYHALRFSPPIENLGKRLVDRLRSHGGRYIALHLRYEKDMLSFTGCAYGLTDAESEELRILRENTNYWKVKKINSTEQRVGGFCPLTPKEVGIFLHALGYPPSTPIYIAAGEIYGGNTHLSELSSRYPNLIFKESLATPEELKDFANHASQTAALDYIICVESDVFVPSYSGNMARAVEGHRRFLGHRKTINPDRKGLVGIFYMLETGELEEGRELSNMVQRMHKNRQGAPRKRHGSLPGIKGRARFRTEEPFYENPYPECICGSKSKLDIT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02060 509 CDD O-FucT_plant 106 427 IPR024709 -
Gma04g02060 509 Gene3D - 243 430 - -
Gma04g02060 509 Pfam GDP-fucose protein O-fucosyltransferase 106 421 IPR019378 -
Gma04g02060 509 PANTHER O-FUCOSYLTRANSFERASE 38 9 504 - -
Gma04g02060 509 PANTHER OS02G0726500 PROTEIN-RELATED 9 504 - -
Gma04g02060 509 PIRSF UCP009360 3 503 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02060 Gma-Chr4 51061138 51067849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02060 75 500 Miscellaneous Gene Families AT1G22460 58.782 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02060 - - gmx:100778847 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02060 04 51061138 51067849 Gma06g01358 06 12760575 12777070 GST