Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02055 ATGTCGTTTCTGGAGGCCGCACCGCACACGCTGACGCGGCGCCCGTCGAGGAGCGCAGCCACGACCTTCTCGACGGAGGTTTTCGACAACGACGTCGTTCCGTCGTCACTTGCCTCCATCTCGCCGATTCTCCGAGTGGCCAATGAGATCGAAAGCGAACGCCCTAGGGTTGCCTATCTATGTCGGTTCTACGCTTTCGAGAAGGCGCACCGGTTGGATCAGAGCTCCAGCGGACGTGGCGTGAGGCAGTTTAAGACGCTGTTGCTGCAGCGATTGGAGAGGGACAATGGACCCAGTCTTGCTGGACGTTTAAAGAAGACAGATGCAAGGGAAATCCAGGCTTATTATCAGCAATACTATGAGCATTATGTCAGAGCTCTTGACCAAGGAGAGCAGGCAGACAGAGCACAGCTCGGGAAAGCTTACCAGACCGCCGGGGTGCTTTTTGAAGTGCTTTGTGCCGTTAACAAGACTGAGAAGGTCGAAGAAGTAGCTCCCGAGATCATTGCGGCTGCTAGAGATGTCCAGGAAAAGACGGAGATATATGCGCCTTTCAACATTCTTCCGTTGGATTCTGCCGGGGCTTCTCAGTCTATTATGCAGCTTGAAGAGATTAAGGCGTCTGTTTCTGCTCTCTGGAATACTCGTGGCCTGAATTGGCCAACTTCATTTGAGCAACAAAGGCAGAGAACTGGAGAATTGGATCTGCTTGATTGGCTTAGAGCCATGTTTGGGGACAACGTCAGGAACCAGAGAGAGCATTTGATTCTGCTTCTTGCTAACTCTCACATAAGGCTAAACCCCAAACCCGAGCCTCTTAACAAGGCATGTAGCTATATCTCGCATCTTCATCTTGATGATCGGGCTGTTGATGCAGTGATGAATAGTCTGTTTAAGAATTACAAAACATGGTGCAAATTTTTGGGACGAAAGCATAGTTTACGACTCCCTCCAGGTCAGCAAGAGATACAACAAAGGAAGTTACTTTATATGGGCTTGTATCTTCTCATATGGGGTGAAGCATCCAATGTTCGCTTCATGCCAGAGTGTCTATGCTACATATTTCATAATATGGCATATGAACTTCATGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAACATCAAGCCTTCTTATGGTGGTGATGATGAGGCATTCTTGCGCAAGGTTATAACTCCCATATACAGAGTAATTGAAACGGAAGCCAAGAAGAGCAGACATGGAGCAGCTCCTCACTCAGCCTGGTGCAACTATGATGATCTAAATGAATATTTCTGGTCACCTGATTGCTTTTCTCTTGGATGGCCTATGCGTGATGATGGTGAATTTTTTAGATCAACATTTAATTTGACACAGGGAAGAAAGGGTTCTCAGAAAACATCTGGAAGAACTGTCAAATCAAATTTTGTTGAGACCCGGTCATTCTGGAACATCTTCCGCAGTTTTGATCGTCTTTGGACCTTCTATATACTGGGTTTGCAGGTGTTGCTCATTGTTGCCTGGAAAGGAATTTCAGTGTTGGATATTTTTCAGAAAGATGTCTTATATGATCTCTCTAGCATATTCATTACAGCAGCCATTCTACGCTTACTTCAAAGTATATTGGACCTGGCTCTGAACTTTCCTGGCTATCATGGTTGGAGATTTACTGATGTGCTACGAAATTTTCTCAAAGTCATTGTCAGTCTTTTTTGGGTTGTTGCTCTTCCACTCTTCTATGTGCATTCCTTCAAAGGCGCCCCTGACTTTATCAAGGATATGCTTTCCTTTACTGATAAAATAAAGGGGATTCCACCATTGTATATGTTAGCAGTTGCAGTTTATCTGCTTCCAAATTTACTAGCAGCTATTCTCTTTCTTTTCCCAATGCTTAGGCGTTGGATTGAAAACTCGGACTGGCACATTATTAGACTTCTCCTATGGTGGTCACAGCCAAGAATCTATGTCGGAAGAGGAATGCATGAGAATCAATTTGCTCTCCTAAAATACACTCTTTTTTGGGTGATTCTCTTGGCTGCTAAATTTTCATTCAGCTTTTTTGTGCAGATCAAACCTCTAGTTCAGCCAACTAAAGACATAATGAGCATTAGGCATGTTGATTTTGGTTGGCATGAGTTTTTCCCCAAAGCTCGACATAACTATGGTGCAGTTGTTGCACTTTGGGCCCCTGTACTTATGGTTTATTTCATGGACACTCAAATCTGGTATTCCATCTTCTCAACTATTTGTGGTGGTGTTATTGGAGCCTTCGATCGTCTTGGAGAGATACGCACTCTGACCATGTTAAGATCACGGTTCCAGTCATTGCCTGGTGCATTCAACACATACTTGGTTCCTACTGACAAGAAGCGGGAAAAGAGATTCACTTTCTCGAAGCGATTTGCCGAGATTTCTGCAAGCAGAAGGAGTGAAGCTGCTAAATTTGCTCAATTATGGAATGAAATGGATCTTTTGATGGTTCCATACTCATCAGATCCTAGCTTGAAAATAATTCAGTGGCCACCGTTTCTGCTTGCAAGCAAGATTCCCATAGCACTGGATATGGCAGCTCAATTTCGAGGAAAGGACTCTGATCTTTGGAGGCGCATATGTGCAGATGAATATATGAAGTGTGCTGTGATTGAATGCTATGAATCTTTTAAAAATGTCCTGAATGCTTTGGTAGTAGGAGAAGCTGAAAAAAGGACAATCTCTGTCATCATTAAGGAAGTTGAAAACAGCATCTCTAAGAATACACTTGTTGCAAATTTTCGAATGGGGTTTTTGCCTTCCCTTTGTAAGAAGTTTGTGGAGCTTGTGGAAATCTTGAAAGATGCAGATTCATCCAAGCAAGGTACAGTGGTGGTCTTGTTGCAAGACATGTTAGAAGTGTTTACGCGTGATATGGTGGTAAATGAGATAAGTGAGTTGGCAGAACTTAATCATAGTAGTAAGGACACTGGAAGGCAACTTTTTGCTGGTACAGATGCAAAACCCGCAGTATTATTCCCTCCTCTGGTTACAGCACAATGGGAGGAACAGATTAGACGTCTTCATTTACTTTTGACGGTGAAGGAATCTGCCATTGAGGTTCCAACAAACCTTGAAGCACGCAGAAGGATTGCATTCTTTACCAATTCATTGTTCATGGACATGCCACGTGCTCCACGAGTTCGTAAAATGCTGTCATTCAGTGTTCTAACTCCATACTACAGTGAAGAGACTGTCTATTCCAAGAATGACCTTGAGGTTGAAAATGAAGATGGTGTGTCAATCATATATTACCTGCAAAAGATCTACCCTGATGAGTGGACTAACTTCATGGAACGGCTTGAATGTAAGAAAGATAGTGAGATATGGGAGAAAGATGAACACATATTGCAGCTACGACACTGGGCCTCATTACGAGGACAAACTCTTAGCAGGACAGTAAGGGGAATGATGTACTACCGGCGGGCTATTAAGCTTCAGGCTTTTCTTGATATGGCAAATGAACAGGAGATACTTGATGGCTATAAAGCTGTTACTGTTCCATCTGAGGAAGATAAAAAGAGCCATAGATCCTTATATGCCAGTTTAGAGGCTGTTGCTGACATGAAGTTTACATACGTCGCCACCTGTCAGAACTATGGGAATCAGAAGCGTAGTGGAGACCGTCGTGCAACAGACATCCTGAATTTGATGGTTAACAATCCCTCACTTCGTGTGGCTTATATTGATGAAATTGAAGAAAGAGAAGGAGGAAAAGTACAGAAAGTTTATTACTCTGTACTGGTCAAAGCTGTGGACAATCTTGACCAAGAAATATTTCGAATAAAATTGCCTGGTCCAGCAAAGATAGGAGAAGGGAAGCCTGAAAATCAAAATCATGCCATCATTTTTACTAGAGGCGAAGCTCTTCAGACTATTGacatgaatcagGATAATTACTTGGAAGAAGCTTTTAAAATGCGCAATCTTTTGGAAGAATTTAATGAAGATCATGGGGTGCGACGACCTACAATATTAGGTGTTCGTGAGCACATCTTTACTGGCAGTGTCTCTTCCCTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCACTGAAGGTGCGATTCCACTATGGTCATCCAGATGTTTTTGATAGAATTTTTCACATAACTCGAGGAGGAATCAGCAAGGCATCTTGTGGCATCAATCTGAGCGAGGATATTTTTGCTGGATTCAACTCAACACTAAGACGCGGAAATATTACTCATCATGAATATATCCAATGCGGAAAGGGTAGAGATGTTGGGCTCAATCAAATCTCACTTTTTGAAGCAAAAGTGGCTTGTGGTAACGGAGAGCAGACATTAAGCAGAGATATCTACAGGCTGGGACATCGTTTTGACTTTTTCCGCATGCTATCATGTTATTTCACGACCATTGGATTTTATATAAGCTCAGTGATTGTGGTCCTCACATGTTATGCATTCCTATATGGCAAACTGTACCTGTCTTTGAGTGGATTTGAGGCTGCAATAGTAAAGTTGGCTAGGAGAAAGGGAGATGATGCACTAAAGGCAGCATTAACTTCTCAATCCCTTGTTCAACTAGGACTTATAATGACTTTGCCCATGTTCATGGAAATTGGACTAGAGAGAGGGTTCAGAACTGCTATCGGTGAGCTCATAATAATGCAGTTGCAGCTAGCACCTGTTTTCTTTACTTTCTCCCTAGGGACAAAGCTGCACTATTTTGGGCGCACTCTTCTGCATGGAGGGGCAAAGTACAGAGCAACTGGGCGTGGTTTTGTTGTTCGCCATGAGAAGTTTGCTGAAAATTACAGGATGTACTCTAGGAGTCACTTTGTAAAAGGGATTGAGCTCACAATTTTGCTCTTATGTTATAAGATTTATGGATCAGCAACACCTGATTCAACGTCATATGGCTTTCTCTCATGGTCAATGTGGTTTATGGTCTGCTCTTTTCTGTTTTCTCCTTTCCTTTTCAATCCATCAGGGTTTGAATGGCAGAAGATAGTTGAGGACTGGGATGATTGGCAAAAGTGGATAAGTATTCGAGGTGGTATTGGTGTTCCTTCAAACAAGAGTTGGGAGTCATGGTGGAATGAGGAACAGGAGCATCTGCAGCACACTGGATTTCTGGGGCGGATATGTGAGATTATACTTGACCTGCGTTTCTTTGTCTATCAGTATGGTATTGTGTATCATCTCAATGTAGCCAGAGGTGACAAGAGCATCTTGgtttatgctctgtcctggatagtgatagtagctgtcatggttatccttaagATTGTATCCATGGGTAGAAAGCAATTCAGTGCAGATTTCCAGTTGATGTTTCGTCTTCTCAAATTGTTTCTGTTCATTGGAGCCATTGTTGCTCTAGGCTTAATGTTTACTCTGCTGAGTCTCACAGTTGGAGACATCTTTGCGAGCCTCCTAGCCTTTTTGCCAACAGCTTGGGCAGTTATTCAGataggacaagcatgCAGGCCATTCGTGAAGGGCATTGGAATGTGGGGTTCTGTCAAAGCTTTAGCAAGGGGCTACGAATACTTGATGGGAGTGGTTATTTTTGCACCAGTAGCCATATTAGCTTGGTTCCCATTTGTTTCAGAATTCCAAACTAGGCTGCTGTTCAACCAAGCATTCAGCCGAGGACTTCAAATCCAGCGCATTCTGGCTGGTGGCAAGAAGAATAAGTAG 5718 0.4248 MSFLEAAPHTLTRRPSRSAATTFSTEVFDNDVVPSSLASISPILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNGPSLAGRLKKTDAREIQAYYQQYYEHYVRALDQGEQADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYAPFNILPLDSAGASQSIMQLEEIKASVSALWNTRGLNWPTSFEQQRQRTGELDLLDWLRAMFGDNVRNQREHLILLLANSHIRLNPKPEPLNKACSYISHLHLDDRAVDAVMNSLFKNYKTWCKFLGRKHSLRLPPGQQEIQQRKLLYMGLYLLIWGEASNVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPIYRVIETEAKKSRHGAAPHSAWCNYDDLNEYFWSPDCFSLGWPMRDDGEFFRSTFNLTQGRKGSQKTSGRTVKSNFVETRSFWNIFRSFDRLWTFYILGLQVLLIVAWKGISVLDIFQKDVLYDLSSIFITAAILRLLQSILDLALNFPGYHGWRFTDVLRNFLKVIVSLFWVVALPLFYVHSFKGAPDFIKDMLSFTDKIKGIPPLYMLAVAVYLLPNLLAAILFLFPMLRRWIENSDWHIIRLLLWWSQPRIYVGRGMHENQFALLKYTLFWVILLAAKFSFSFFVQIKPLVQPTKDIMSIRHVDFGWHEFFPKARHNYGAVVALWAPVLMVYFMDTQIWYSIFSTICGGVIGAFDRLGEIRTLTMLRSRFQSLPGAFNTYLVPTDKKREKRFTFSKRFAEISASRRSEAAKFAQLWNEMDLLMVPYSSDPSLKIIQWPPFLLASKIPIALDMAAQFRGKDSDLWRRICADEYMKCAVIECYESFKNVLNALVVGEAEKRTISVIIKEVENSISKNTLVANFRMGFLPSLCKKFVELVEILKDADSSKQGTVVVLLQDMLEVFTRDMVVNEISELAELNHSSKDTGRQLFAGTDAKPAVLFPPLVTAQWEEQIRRLHLLLTVKESAIEVPTNLEARRRIAFFTNSLFMDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWTNFMERLECKKDSEIWEKDEHILQLRHWASLRGQTLSRTVRGMMYYRRAIKLQAFLDMANEQEILDGYKAVTVPSEEDKKSHRSLYASLEAVADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEIEEREGGKVQKVYYSVLVKAVDNLDQEIFRIKLPGPAKIGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEAFKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGISKASCGINLSEDIFAGFNSTLRRGNITHHEYIQCGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTIGFYISSVIVVLTCYAFLYGKLYLSLSGFEAAIVKLARRKGDDALKAALTSQSLVQLGLIMTLPMFMEIGLERGFRTAIGELIIMQLQLAPVFFTFSLGTKLHYFGRTLLHGGAKYRATGRGFVVRHEKFAENYRMYSRSHFVKGIELTILLLCYKIYGSATPDSTSYGFLSWSMWFMVCSFLFSPFLFNPSGFEWQKIVEDWDDWQKWISIRGGIGVPSNKSWESWWNEEQEHLQHTGFLGRICEIILDLRFFVYQYGIVYHLNVARGDKSILVYALSWIVIVAVMVILKIVSMGRKQFSADFQLMFRLLKLFLFIGAIVALGLMFTLLSLTVGDIFASLLAFLPTAWAVIQIGQACRPFVKGIGMWGSVKALARGYEYLMGVVIFAPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKNK 1905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02055 1905 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 3 1904 - -
Gma04g02055 1905 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 327 438 IPR026899 -
Gma04g02055 1905 Pfam 1,3-beta-glucan synthase component 1027 1720 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Gma04g02055 1905 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 3 1904 - -
Gma04g02055 1905 Gene3D - 25 187 IPR023175 -
Gma04g02055 1905 SMART FKS1_dom1_2 325 441 IPR026899 -
Gma04g02055 1905 Pfam Vta1 like 39 167 IPR039431 -
Gma04g02055 1905 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 910 923 IPR004838 GO:0003824|GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02055 Gma-Chr4 51006892 51020920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02055 5 1905 Glycosyltransferase AT1G05570 59.724 0.0 2365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02055 K11000 - gmx:100777985 3280.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01886 05 40316524 40329914 Gma04g02055 04 51006892 51020920 PCT