Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01996 ATGCAAGAGACGCTCCTCACTCTCTCCGAACACCAACAAGACGACAACAACAAAGACATCGAGCTGCTCGTGGTTCCTCCGCCGCCGTGCCGCCGCCCTCCGCGGATGGCGCGGCGCGTGTCCCCCGGCGGGGTGGAAAAAGCCCTCCCCAACGGCGACATCTACAGCGGAAGCCTCTCCGGCAACGTCCCGCACGGCACCGGAAAATACCTCTGGTCGGATGGGTGCATGTACGAGGGCGACTGGAAGAAAGGCAAAGCGTGCGGCAAGGGCCGCTTCTCGTGGCCCTCCGGCGCGACCTACGAGGGCGAGTTCGCCGCCGGGAGAATGCACGGCCGCGGCACCTTCGTCGGCGTCGACGGCGACACCTACCGCGGCGCGTGGCTCTCCGACCGCAAGCACGGCTTCGGCGAGAAACGCTACGCCAACGGCGACGTCTACGAAGGGTTCTGGAGGTGCAACCTGCAGGAGGGGGAAGGGAGGTACACGTGGCGCAACGGAAACAACTACGTCGGAGAGTGGAAGGGTGGCGCCATCTCCGGCAAAGGCGTGTTGGTGTGGAAGAACGGGAACCGTTACGAAGGGTGCTGGGAGAACGGGGTTCCGAAGGGGAGAGGGGTGTTTACGTGGCGCGATGGAAGCACTTCCTCTGGGAATTGGGGGAAGGAGTTCGTGAATGAGAAACGCGTGTCGGTGGATGTCTGTAGTAATCACAACAATAATAAGAGTGTGAGTTTTCCCAGGATTTGTATTTGGGAGCTTGATGGTGAAGCTGGGGATATTACTTGTGATATTGTGGAGGCTTCTATGATTTATGGTGGTGGTGGAGGAGTGTGTGAGAGTGATGTACAGTTGCAGAAGAGTCCTTGTGGTTCTGTTGATGGGGATGTTAAGAAACCGGGTCATACTGTTTCTAAAGGCCATAAGAATTATGATTTGATGCTTAATCTTCAACTGGGTATTAGATACTCTGTTGGGAAGCACGCTTCGGTTTTGCGAGATCTTAGGCCGGGGGATTTTGATCCCAAGGAGAAGTTCTGGACTAGGTTTCCTCCAGAAGGGTCTAAGTTTACACCTCCACATCAATCTGTGGATTTCAGGTGGAAAGATTACTGCCCTGTGGTGTTCAGACATCTAAGGGAATTGTTTGGGATAGATCCTGCGGATTACATGCTTGCTATTTGCGGCAATGACACACTTAGGGAGATGTCTTCTCCTGGCAAAAGTGGAAGCTTCTTTTACCTCACTCAAGACGACTGGTTCATTATCAAAACCTTGAAGAAGTCGGAAGTCAAGGTGCTCATCAGGATGCTTCCAAGTTACTATCAACATGTGAGTCAGTACAAGAATTCGCTGGTGACAAAATTCCTGGGGGTTCATTGTGTCAAACCTATTGGAGGTCAGAAGACTCGGTTTATTGTGATGGGCAATGTATTTTGTTCGGAGTATCGGATCCATAAGCGGTTTGACCTCAAAGGTTCTTCTCATGGTCGTACAACTGATAAACCCCGGGAGGAAATTGACGAGACTACCACTCTTAAAGACCTTGATCTTTGTTTTGTCTTCCGCCTGGAACATTCTTGGTTTCAAGAGCTTAAATGGCAACTTGATAGAGACTGTGAATTCCTGGAAGCAGAGGGAATAATGGATTACAGTTTTTTGATTGGCCTTCATTTTCGTGATGATAGCTCAGTTGATGAAGTAAAGAGTTTACCAGACGAGTTGTGTTCAGGCAAGAGAGACATGCAAAATGATGACATACAGGATATGAAGTGGATACCCATAGACCGgggacctctaattcgtctgggaacaaacatgcctgccagagcagagagagtgtgtaaagctggattggatccgcacactgGAGCACAGGAAGAGGCACAGCAGCAACAGCAACAACAAGCAATTGACAACACGAAGGAATAA 1932 0.4896 MQETLLTLSEHQQDDNNKDIELLVVPPPPCRRPPRMARRVSPGGVEKALPNGDIYSGSLSGNVPHGTGKYLWSDGCMYEGDWKKGKACGKGRFSWPSGATYEGEFAAGRMHGRGTFVGVDGDTYRGAWLSDRKHGFGEKRYANGDVYEGFWRCNLQEGEGRYTWRNGNNYVGEWKGGAISGKGVLVWKNGNRYEGCWENGVPKGRGVFTWRDGSTSSGNWGKEFVNEKRVSVDVCSNHNNNKSVSFPRICIWELDGEAGDITCDIVEASMIYGGGGGVCESDVQLQKSPCGSVDGDVKKPGHTVSKGHKNYDLMLNLQLGIRYSVGKHASVLRDLRPGDFDPKEKFWTRFPPEGSKFTPPHQSVDFRWKDYCPVVFRHLRELFGIDPADYMLAICGNDTLREMSSPGKSGSFFYLTQDDWFIIKTLKKSEVKVLIRMLPSYYQHVSQYKNSLVTKFLGVHCVKPIGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTTDKPREEIDETTTLKDLDLCFVFRLEHSWFQELKWQLDRDCEFLEAEGIMDYSFLIGLHFRDDSSVDEVKSLPDELCSGKRDMQNDDIQDMKWIPIDRGPLIRLGTNMPARAERVCKAGLDPHTGAQEEAQQQQQQQAIDNTKE 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01996 643 PIRSF PIP5K_plant 35 227 IPR017163 GO:0005524|GO:0016308
Gma04g01996 643 PIRSF PIP5K_plant 221 639 IPR017163 GO:0005524|GO:0016308
Gma04g01996 643 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 21 626 IPR023610 -
Gma04g01996 643 SMART morn 191 212 IPR003409 -
Gma04g01996 643 SMART morn 168 189 IPR003409 -
Gma04g01996 643 SMART morn 122 143 IPR003409 -
Gma04g01996 643 SMART morn 99 120 IPR003409 -
Gma04g01996 643 SMART morn 145 166 IPR003409 -
Gma04g01996 643 SMART morn 76 97 IPR003409 -
Gma04g01996 643 SMART morn 53 74 IPR003409 -
Gma04g01996 643 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 296 477 IPR027484 -
Gma04g01996 643 Gene3D - 40 84 - -
Gma04g01996 643 Gene3D - 85 127 - -
Gma04g01996 643 Gene3D - 176 247 - -
Gma04g01996 643 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 395 626 IPR002498 GO:0016307|GO:0046488
Gma04g01996 643 Gene3D - 128 175 - -
Gma04g01996 643 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 50 177 - -
Gma04g01996 643 MobiDBLite consensus disorder prediction 620 643 - -
Gma04g01996 643 CDD PIPKc_AtPIP5K_like 310 568 - -
Gma04g01996 643 Gene3D - 478 593 - -
Gma04g01996 643 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 303 643 IPR002498 GO:0016307|GO:0046488
Gma04g01996 643 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 21 626 - -
Gma04g01996 643 Pfam MORN repeat 55 77 IPR003409 -
Gma04g01996 643 Pfam MORN repeat 124 146 IPR003409 -
Gma04g01996 643 Pfam MORN repeat 147 168 IPR003409 -
Gma04g01996 643 Pfam MORN repeat 78 99 IPR003409 -
Gma04g01996 643 Pfam MORN repeat 101 123 IPR003409 -
Gma04g01996 643 Pfam MORN repeat 170 192 IPR003409 -
Gma04g01996 643 Pfam MORN repeat 193 215 IPR003409 -
Gma04g01996 643 MobiDBLite consensus disorder prediction 625 643 - -
Gma04g01996 643 SUPERFAMILY SAICAR synthase-like 306 570 - -
Gma04g01996 643 SMART PIPK_2 336 623 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01996 Gma-Chr4 50383160 50389619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01996 20 616 Acyl Lipid Metabolism Gene Families AT1G21980 66.667 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01996 K00889 - gmx:100808235 1312.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01996 04 50383160 50389619 Gma06g01420 06 13489319 13495993 GST
Gma05g01934 05 40736530 40756168 Gma04g01996 04 50383160 50389619 PCT
Gma08g00043 08 359096 366901 Gma04g01996 04 50383160 50389619 PCT
Gma04g01996 04 50383160 50389619 Gma05g01934 05 40736530 40756168 PCT
Gma04g01996 04 50383160 50389619 Gma08g00043 08 359096 366901 PCT