Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01995 ATGAATTCCTTTTGTGGCTCCCAACACCGCACAAAACCCGTTCCAGCTCGAATCTCCGACCAACCCACTTCAACCTCCTCCTCCTCCGACCACCACCACCCCATGGCACCGCCCGCCACGTCACCAGTGTTTCGCTTTCGCTCGCTCTCCAGCTGCGCGCACAACCGCCCCTCCCCCTTGTCCTCCTCCTTCACCGCCACAACCGTGAAGCGATCCACCTCCGTGAGGTTCACGCGACAGCACACCGCCACGCGCAACGAGGTCATGCTGAAGGACATCGTCGGGAGCGGCATCTCCGGAATATTATACAAGTGGGTGAACTACGGGCGCGGGTGGCGCCCCCGCTGGTTCGTCCTCCACGACGGTGTTTTGTCCTACTACAATATCCACGGCCCTGATAAGCTAGTCCTCAACCACGAGGTCGAGGCCGAGGCCATGGTCATTGGCGAAGAGTCCCTCCGCCGCATCAACAGCCACCGCCATTGCCCCTCTCGCAACCACAAACCCGTCAGCGAAATTCACCTCATGGTGTGTTCGGTGAGGGAGAACAGGTCAGATGAGAGGAGGTTTTCTGTGTGTACGGGGACAAAGAAGAGGCTGCATTTGAGGGCGGAGAGCAAGGAAGACAGAGCCACCTGGGTGGAGGCAATGATGGCCGTCAAGGACTTGTTTCCTCGCTTGTCCAATGCAGAGGCTATGTCACCCGTGGCCTCGGTGCTAGTTTCCACAGAGAGGTTGAGAGATCGGCTTTTAATGGAGGGTGTGAGTGAAACTGCTATCAGGGAAAGTGAGGAAATCATGAAGTCTGAGTTCTCACAGTTGCAGAAGCATATTGTGGCCCTCAAGCAGCAGCAGTCTCTACTTATGGACACGCTGCGCCATTTAGAGGCAGAGAAGGTTGACTTGGAGAACACACTTATTGAGGACCGAAGGCAATCCAAGGATGAAACAGATCCCTATCTATCAACGCAAAAAAAGTATAGTGAGGGAAGTGGTGATGATTCTTCTGAAGAGCACTATAGGAACAATCACTCAGAAGATGAGGACGATGCATTCTACGATACATGTGATGATATTCTATCAACAGGCTCTGACCACCCGAGATCCTGCCATGATTCTGAATGTGAGGAGATTATTCCAAATGGTGATGAAAAATCCCCCACCGGATCTGTTGGATTTAATCATCCCCACATCAAGCGACGAAAGAACTTGCCTGATCCTGTTGAGAAAGAGAGCAGCGTCAGTCTTTGGTCAATCATAAAAGATAACATTGGGAAGGATCTTACAAAAGTTTGTCTTCCAGTTTACTTCAACGAGCCTCTCTCCTCACTGCAGAAATGTTTTGAAGATCTTGAGTACTCTTATCTTCTAGACCAAGCATATGAATGGGGTAAAATGGGTGACAATCTAAAGAGGGTGCTGCATGTGGCTGCATTTGCAGTTTCAGGGTATGCTAGCACCAATGGTAGGAGTTGCAAACCGTTTAATCCACTGTTGGGTGAGACATATGAAGCAGAGTATCAAGACAAAGGCATTCGTTTTATCTCTGAGAAGGTCAGTCATCACCCAATGATTGTTGCATGCCATTGTGAGGGAAAAGGCTGGAAATTTTGGGGTGACAGCAATTTAAAAAGTAAATTTTGGGGTCGTTCAATTCAACTTGATCCCGTTGGATTATTGACGGTAGAATTTGATGACGGAGAAGTCTTCCATTGGAGCAAGGTAACAACATCCATTTACAACCTCATTTTAGGAAAAGTCTACTGTGTCCATTATGGTACAATGCGTGTAGAGGGGAACCGTGATTATTTATGTAAGATAAAATTCAAGGAGCAGTCAATCATTGATAGAAACCCTCACCAGATTCATGGCGTAGTGGAAGATAAGAAAGGTAGAACAGTGGCAACTCTGTTTGGGACGTGGGATGAGAGCTTGCATTACGTAATTGGAGGGAATTCTGGGAAAGGAAAAGGGTCCTCCTATGTGTCATCAAAACCACATGTTTTGTGGAAGCGAAGCCCAACATCAGAGTACCAGACAAGATATAACCTCACACAATTTGCTATTACACTAAATGAAATCACACCTGGATTAAAGgagaagttgccaccgacagattcaagactaagacctgatcaaaggtgtttggagaatggacagcatgaaatggccaattctgaaaagttgcggctggaacaaagtcagcggcaggcacgaaaggtgcaagagaagggttggaaaccaaggtggtttgccaaggaaaaaggcagcaactcttaccgttatgttggagggtactgggaggccagggaaaaggggaactgggaatcttgtcctgacatttttggccaagtctcaaccgatactgattttaacccaacttcataa 2388 0.4242 MNSFCGSQHRTKPVPARISDQPTSTSSSSDHHHPMAPPATSPVFRFRSLSSCAHNRPSPLSSSFTATTVKRSTSVRFTRQHTATRNEVMLKDIVGSGISGILYKWVNYGRGWRPRWFVLHDGVLSYYNIHGPDKLVLNHEVEAEAMVIGEESLRRINSHRHCPSRNHKPVSEIHLMVCSVRENRSDERRFSVCTGTKKRLHLRAESKEDRATWVEAMMAVKDLFPRLSNAEAMSPVASVLVSTERLRDRLLMEGVSETAIRESEEIMKSEFSQLQKHIVALKQQQSLLMDTLRHLEAEKVDLENTLIEDRRQSKDETDPYLSTQKKYSEGSGDDSSEEHYRNNHSEDEDDAFYDTCDDILSTGSDHPRSCHDSECEEIIPNGDEKSPTGSVGFNHPHIKRRKNLPDPVEKESSVSLWSIIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLLDQAYEWGKMGDNLKRVLHVAAFAVSGYASTNGRSCKPFNPLLGETYEAEYQDKGIRFISEKVSHHPMIVACHCEGKGWKFWGDSNLKSKFWGRSIQLDPVGLLTVEFDDGEVFHWSKVTTSIYNLILGKVYCVHYGTMRVEGNRDYLCKIKFKEQSIIDRNPHQIHGVVEDKKGRTVATLFGTWDESLHYVIGGNSGKGKGSSYVSSKPHVLWKRSPTSEYQTRYNLTQFAITLNEITPGLKEKLPPTDSRLRPDQRCLENGQHEMANSEKLRLEQSQRQARKVQEKGWKPRWFAKEKGSNSYRYVGGYWEAREKGNWESCPDIFGQVSTDTDFNPTS 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01995 795 Gene3D - 713 781 - -
Gma04g01995 795 MobiDBLite consensus disorder prediction 330 349 - -
Gma04g01995 795 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 787 IPR000648 GO:0008289
Gma04g01995 795 MobiDBLite consensus disorder prediction 1 37 - -
Gma04g01995 795 Pfam Oxysterol-binding protein 415 771 IPR000648 GO:0008289
Gma04g01995 795 ProSiteProfiles PH domain profile. 95 222 IPR001849 -
Gma04g01995 795 Pfam Pleckstrin homology domain 103 217 - -
Gma04g01995 795 MobiDBLite consensus disorder prediction 379 406 - -
Gma04g01995 795 Gene3D - 96 223 IPR011993 -
Gma04g01995 795 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 2 787 - -
Gma04g01995 795 Coils Coil 724 744 - -
Gma04g01995 795 MobiDBLite consensus disorder prediction 17 34 - -
Gma04g01995 795 SUPERFAMILY Oxysterol-binding protein-like 410 784 IPR037239 -
Gma04g01995 795 SMART PH_update 96 224 IPR001849 -
Gma04g01995 795 Gene3D - 501 674 - -
Gma04g01995 795 MobiDBLite consensus disorder prediction 308 322 - -
Gma04g01995 795 Coils Coil 278 312 - -
Gma04g01995 795 SUPERFAMILY PH domain-like 16 217 - -
Gma04g01995 795 MobiDBLite consensus disorder prediction 308 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01995 Gma-Chr4 50368072 50376163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01995 K20456 - gmx:100807703 1602.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01995 04 50368072 50376163 Gma04g01995 04 50368072 50376163 ECH
Gma04g01995 04 50368072 50376163 Gma06g01421 06 13502564 13511488 GST