Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01944 ATGGAAAGCGTGGACGCGAACAGCGAAGTCGAAAACGACGCGGAAATGAAGCTCTTGAGAGATAAATTCAGGCTCTCCGCAATCTCCATCATCGAATCTCAAGCAAAACAAAACGGCATGGAAGTATCAAAAGTCGTAGTCACTTGCGTTGCGGATTTGGCCTTCAAGTATACGGAGCGCCTGGCTAGGGATCTTCATCTATTTGCGCAGCATGCGAATCGTAAATCTGTAAATATGGAAGATGTGATACTTTGTGGACATAGGAATGAACATGTATCTGGCATGTTGAGGAGCTTCTCCAATGATTTAAAAGCCAAGGATCCTCAATCTGAAAAGAAGCGAAAGAAAGAACCCAAAAAGAACGACAAAGGAACCACTTAG 381 0.4383 MESVDANSEVENDAEMKLLRDKFRLSAISIIESQAKQNGMEVSKVVVTCVADLAFKYTERLARDLHLFAQHANRKSVNMEDVILCGHRNEHVSGMLRSFSNDLKAKDPQSEKKRKKEPKKNDKGTT 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01944 126 PANTHER CENTROMERE PROTEIN S 3 125 - -
Gma04g01944 126 MobiDBLite consensus disorder prediction 104 126 - -
Gma04g01944 126 Pfam CENP-S protein 19 91 IPR029003 GO:0071821
Gma04g01944 126 MobiDBLite consensus disorder prediction 96 126 - -
Gma04g01944 126 SUPERFAMILY Histone-fold 30 90 IPR009072 GO:0046982
Gma04g01944 126 Gene3D Histone, subunit A 1 117 IPR009072 GO:0046982
Gma04g01944 126 PANTHER CORTISTATIN 3 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01944 Gma-Chr4 49870236 49871217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01944 K11511 - gmx:100798682 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01944 04 49870236 49871217 Gma04g01944 04 49870236 49871217 ECH
Gma04g01944 04 49870236 49871217 Gma06g01460 06 13957124 13957977 GST