Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01912 ATGGGAGAGGAGGAAAAGAAACCAGAGGAACCCATGGCAAAGGAGAAAAACCCAGAGGAAGAAGCAACCCAAGAGAAAAAACCGGAGCAAGAGTCCAAAGAGGAAGTTGCTGCTGCTGCTGCTGCTccgccaccgccaccgccaccgccaccgccCGAGATTGTGCTCAAAGTGTTCATGCATTGCGAGGGTTGCGCCCGCAAGGTTCGTCGCTCCCTCAAAGGATTCCCAGGTGTCGACGATGTTGTCACCGATTGCAAATCTCACAAGGTGGTCGTTAAGGGAGAGAAAGCGGATCCGCTCAAGGTTTTGGAGAGAATACAGAGGAAGAGTCACAGACAGGTCGAGCTTCTTTCTCCGATCCCGAAACCTCAAGAGGAGAAGAAGGTCCAAGAGGAAGAGAAGCCCAAGCCCAACCCCGAAGAGAAGAAAGAAGAGCCTCAGATTGTGACGGTTCTGAAAGTTCACATGCATTGCGAAGCTTGCTCTCAGGAAATCAAGAGACGCATACAGAGAATGAAGGGAGTGGAATCAGCAGAACCCGATCTGAAGAACTCACAAGTGAGCGTGAAGGGGGTGTACGATCCAGCAAAGTTGGTTGAGTACGTTTACAAGAGAACCGGGAAGCACGCAGTGATAGTGAAGCAAGAGCCAGAAAAGAAAGAGAAAGTGGAGGAAGCAAAAGAGGAGAAGAAAGAGGAAGAGAAGAAGAGTGGTGGTgaaggagaagaaaacaaagagaagaaggaagaagaagccaaagtagaggaagCAACAACACCAGCAACTACTGAAGACACCAACAAGGTTGTTCCAGAGGTTAAGATTAATGAATACTTCTATAACCCACCAAGGTATGGCATGGAGGTGTATGCATATCCTGCACACCCTGCGTATTTCCATTCCTACCCTCCCCAGATGTTCAGCGATGAGAACCCAAATGCCTGCACTGTCATGTAG 960 0.4479 MGEEEKKPEEPMAKEKNPEEEATQEKKPEQESKEEVAAAAAAPPPPPPPPPPEIVLKVFMHCEGCARKVRRSLKGFPGVDDVVTDCKSHKVVVKGEKADPLKVLERIQRKSHRQVELLSPIPKPQEEKKVQEEEKPKPNPEEKKEEPQIVTVLKVHMHCEACSQEIKRRIQRMKGVESAEPDLKNSQVSVKGVYDPAKLVEYVYKRTGKHAVIVKQEPEKKEKVEEAKEEKKEEEKKSGGEGEENKEKKEEEAKVEEATTPATTEDTNKVVPEVKINEYFYNPPRYGMEVYAYPAHPAYFHSYPPQMFSDENPNACTVM 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01912 319 CDD HMA 152 211 IPR006121 GO:0046872
Gma04g01912 319 Coils Coil 214 244 - -
Gma04g01912 319 MobiDBLite consensus disorder prediction 218 269 - -
Gma04g01912 319 MobiDBLite consensus disorder prediction 218 259 - -
Gma04g01912 319 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 319 - -
Gma04g01912 319 MobiDBLite consensus disorder prediction 122 147 - -
Gma04g01912 319 Gene3D - 51 123 - -
Gma04g01912 319 ProSiteProfiles Heavy-metal-associated domain profile. 157 203 IPR006121 GO:0046872
Gma04g01912 319 MobiDBLite consensus disorder prediction 40 54 - -
Gma04g01912 319 ProSiteProfiles Heavy-metal-associated domain profile. 60 116 IPR006121 GO:0046872
Gma04g01912 319 Pfam Heavy-metal-associated domain 153 209 IPR006121 GO:0046872
Gma04g01912 319 Pfam Heavy-metal-associated domain 56 110 IPR006121 GO:0046872
Gma04g01912 319 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 319 IPR044577 GO:0046872
Gma04g01912 319 SUPERFAMILY HMA, heavy metal-associated domain 149 213 IPR036163 GO:0046872
Gma04g01912 319 SUPERFAMILY HMA, heavy metal-associated domain 55 110 IPR036163 GO:0046872
Gma04g01912 319 MobiDBLite consensus disorder prediction 112 147 - -
Gma04g01912 319 MobiDBLite consensus disorder prediction 1 54 - -
Gma04g01912 319 Gene3D - 146 214 - -
Gma04g01912 319 MobiDBLite consensus disorder prediction 1 34 - -
Gma04g01912 319 CDD HMA 60 116 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01912 Gma-Chr4 49419911 49422120 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01912 - - gmx:100787932 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01912 04 49419911 49422120 Gma06g01497 06 14413802 14416158 GST
Gma05g01997 05 41345498 41347319 Gma04g01912 04 49419911 49422120 PCT
Gma08g00105 08 912120 914066 Gma04g01912 04 49419911 49422120 PCT
Gma04g01912 04 49419911 49422120 Gma05g01997 05 41345498 41347319 PCT
Gma04g01912 04 49419911 49422120 Gma08g00105 08 912120 914066 PCT