Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01909 ATGGAGAAGCCATCGTCGTCGTCGTCGTCGCGAAGAAAATCGAGCACGAAGGTGAAAGCTTCAACCGATGCGAACACGAACCTGAGCATGCTCAACGAGGACCTTCTCCAGAACATTCTAGCGAGGCTTCCTGCTCTGCATTTCGCTTCCGCAGCTTGCGTCAGCAAATCATGGAACTCTCTCTGCAATCGCATCCTCACTCGCCCCAAACTCTCTTCCGCGATTTCTCTCAACCCTTCGCTCCCCGATGCTGTCAACGAGGTTGTTCACAAGGTTCTTTCGGAGCCAATTCGACCCCATTTCGCTATTGCCAATATCGGAACTGGATTCAGCACTGCCAAGACTTTGTGCCTTATTAGACAGTCGTTGGGATCCAATATTCCTGTTATTGTTACCGTTGCGAGTGGTATTATGGGAAGGGATGCTGTAACCGATGAGTTTAAAGAGGTCAAATGGGGTGCCCTTTTTAGTGGCTTTGGCGAGGAATCGTATACGAGGTTTATAAACGAAGGCTTAGTTTTGACTGTTGGGTACTTGCCTGGATTGAAAGTTGAAGCAGTGCCCTTGCGACGGCCGACAAAGGTAACGCAAGCAATATGGGTTGACAATTTCATAAAGGATATTAAGGAATATTCAGCCTCTGTCTCCAGTAGCCCATTCCCTGTTGGGATTATATTGTTTGGAGAAGCAAGCAGTGACATGAAATTGGTTCTGGAGAAATTGGATCATGCCATGCCTATGGACACGGTCATTGTGGGTGATGAGAGAGGCTCCTTTGACTTTGTACACAAAAGTGGGAATGATTCTAGAATCATTTGTAGTAAAAAAGGAAACATAGAAGCTGTTGCTCTTGTATTTGCTCGGGACAGAAACAGGTCTTTGGGAACTATTAGGTTTCATGTTGCATTGTCAAATGGTGTTTCAACTGTGGGTCCCAGATACAAGGCAGCCTCAGTTAAATCAAACAATGCTGATTGTTCAACATGGCTAACTGCTAGGAGGGAAGGGCAACAGGAAAATCTTGATGGTCAGAGTATTCTACTTGATATCAACAATTTGCTGGACAATCATGTTGAGTCTCCTGATTTGCACATTGGGGTAATTAAACATAGGAAATTATCCACTGGAGCAGAGAAGCCAATGCCAAGAACTTGTATTTCATATCATGGAGTTGTGGGAGGTGATGAAGAGTATCTATATGTTGACGGCATTGGCATAAAAACAGGAGATTTCTTTCAGTTCTACTATTCAGATCCAAATATTGCCTTAGCTTCATTAACCAAGGTCCATGATGCCCTCAAGAGTATTAAACTGGAAAAAAAATCCAAGAGTTCCAAGGGTGATGGAGACAACGCTACCAATGTTTTTGGGGGTATTATTTTTGCTTGTTACAGCCGTGGTGAATCCTTCTTTGGACGTCAGAATGTTGATAGCTCCCCTTTCTTGGAGAATTTTCCAGGAGTGCCAGTGTCTGGAATATTTTGTGGTGGAGAAATGGTGCGTCCTTGTACCACTGTGATTGGTCAATGTGAAGGAGCAAGCCCCATTAGTTGCTGTCTGCATGTGTACAGCACTGTCTACTTAGCAATGTCGTATACTCCCCCCTCTGTGGAAGATTAG 1620 0.4457 MEKPSSSSSSRRKSSTKVKASTDANTNLSMLNEDLLQNILARLPALHFASAACVSKSWNSLCNRILTRPKLSSAISLNPSLPDAVNEVVHKVLSEPIRPHFAIANIGTGFSTAKTLCLIRQSLGSNIPVIVTVASGIMGRDAVTDEFKEVKWGALFSGFGEESYTRFINEGLVLTVGYLPGLKVEAVPLRRPTKVTQAIWVDNFIKDIKEYSASVSSSPFPVGIILFGEASSDMKLVLEKLDHAMPMDTVIVGDERGSFDFVHKSGNDSRIICSKKGNIEAVALVFARDRNRSLGTIRFHVALSNGVSTVGPRYKAASVKSNNADCSTWLTARREGQQENLDGQSILLDINNLLDNHVESPDLHIGVIKHRKLSTGAEKPMPRTCISYHGVVGGDEEYLYVDGIGIKTGDFFQFYYSDPNIALASLTKVHDALKSIKLEKKSKSSKGDGDNATNVFGGIIFACYSRGESFFGRQNVDSSPFLENFPGVPVSGIFCGGEMVRPCTTVIGQCEGASPISCCLHVYSTVYLAMSYTPPSVED 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01909 539 SUPERFAMILY F-box domain 26 64 IPR036047 GO:0005515
Gma04g01909 539 SMART fbox_2 31 71 IPR001810 GO:0005515
Gma04g01909 539 Gene3D - 11 66 - -
Gma04g01909 539 Pfam F-box domain 28 65 IPR001810 GO:0005515
Gma04g01909 539 PANTHER SKP2-LIKE, FIST C DOMAIN, FIST DOMAIN, N-TERMINAL ISOFORM 1 27 538 - -
Gma04g01909 539 Pfam FIST N domain 117 322 IPR013702 -
Gma04g01909 539 MobiDBLite consensus disorder prediction 1 22 - -
Gma04g01909 539 PANTHER F-BOX ONLY PROTEIN 22 27 538 - -
Gma04g01909 539 SMART FIST_C_2 346 502 IPR019494 -
Gma04g01909 539 Pfam FIST C domain 405 500 IPR019494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01909 Gma-Chr4 49353062 49361556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01909 - - gmx:100786866 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01909 04 49353062 49361556 Gma06g01500 06 14462457 14468828 GST