Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01897 ATGAGAAGGCCTTGCAAACATTCTAAGAAGAAACATGATCTCTTTGAATGTCTCCCTGACGATCTCCTTGTCCTTATTCTTTCTAAGCTCAGCTCCACCGCTTCTTCTCCTTCTGATTTCATCAACATCATCTTAACATGCAAGAGGTTAAACCGGTTAGGCCTGCACCGTCTTGTGTTATCCAAAGCTGCCTCTAAACTATTCGCCATAAAACCGAAAAATTGGTCGGAATATGCTCACTCTTTTCTCAAACACTGCGCTAACGCCGGTAACGTGGATGCCTGTTACACTCTCGGAATGATCCGATTTTACTGTTTGAAAAATCGAGGGAGCGGACTCTCGTTAATGGCGAAGGCGGCCATGAAGCTGCACGCGCCGGCTCTGTACTCGCTGGCGGTGATTCAGTTCAACGGCAGCGGCGGTTCGAAGCGCGACAAGGATCTACGCGCGGGCGTGGCCTTGTCGGCGCGTGCGTCGTTACTCGGCCACATCGACGCGCTTCGGGAGTTAGGCCATTGCCTTCAAGACGGTTACGGCGTGCGGCAGAACGTCACGGAGGGGAGGCGGCTACTCGTGCAGGCCAACGTGCGCGAGCTCGCGTATGTCCTACGCGCCGTGGCGCCTTCGCGCTGCTACGAGACCTCGCTGCTGACGTGGCGCGCGCTGAGATGTCAGAGAAACAACAACAACAACAACGCGGTGGTGGCATGTCCTTTGCTGAGTGATTATGGTTACAACGTGGCGGCGCCGGAGGTGCAGCCGGCGAATTGGTTTCTGAGAGAGTGGTTTGAGTCCGGTAAGGGAAAATTGGAGGAAGGACTAAGGCTTTGCGCGCACATTGGGTGTGGCCGACCGGAGACGCGGCCGCACGAGTTTCGCCGGTGTTCGGTTTGCGGCAAAGTGAATTACTGTTCTCGTGGATGTCAGGCGCTGGATTGGAAGTTGCGGCATAAGATGGAGTGTTCGCCGGTGGAAATGTACGATGGTGGTGTGGATGGAGAGAATGAGTTTGTGGTCCCAAACGATGCCGTTTGA 1035 0.5459 MRRPCKHSKKKHDLFECLPDDLLVLILSKLSSTASSPSDFINIILTCKRLNRLGLHRLVLSKAASKLFAIKPKNWSEYAHSFLKHCANAGNVDACYTLGMIRFYCLKNRGSGLSLMAKAAMKLHAPALYSLAVIQFNGSGGSKRDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVRQNVTEGRRLLVQANVRELAYVLRAVAPSRCYETSLLTWRALRCQRNNNNNNAVVACPLLSDYGYNVAAPEVQPANWFLREWFESGKGKLEEGLRLCAHIGCGRPETRPHEFRRCSVCGKVNYCSRGCQALDWKLRHKMECSPVEMYDGGVDGENEFVVPNDAV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01897 344 Gene3D Tetratricopeptide repeat domain 55 206 IPR011990 GO:0005515
Gma04g01897 344 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 6 336 - -
Gma04g01897 344 SUPERFAMILY HCP-like 77 194 - -
Gma04g01897 344 Gene3D - 268 325 - -
Gma04g01897 344 ProSiteProfiles Zinc finger MYND-type profile. 279 321 IPR002893 -
Gma04g01897 344 PANTHER MYND DOMAIN-CONTAINING 6 336 IPR044508 -
Gma04g01897 344 Pfam MYND finger 282 321 IPR002893 -
Gma04g01897 344 SUPERFAMILY HIT/MYND zinc finger-like 275 324 - -
Gma04g01897 344 SUPERFAMILY F-box domain 10 71 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01897 Gma-Chr4 49222324 49224045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01897 - - gmx:100781713 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01897 04 49222324 49224045 Gma06g01514 06 14585296 14586919 GST