Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01880 ATGGCGGCGGAGCTAGACAGCCACGCCGTGGCTTCCGATATGATCGACTTCCTCAACGCTTCTCCGACGGCTTTCCACGCCGTCGACGAGGCAAAGAGGCGTTTGCGAAGCGCGGGGTACCACCAACTCTCGGAGAGGGAACCGTGGAAACTTCAACCGGGCAACAAGTACTTCTTCACCAGAAACCACTCCACCATCGTCGCCTTCGCCATCGGCAAAAAGTATGTTTCTGGAAATGGATTCCACATAATCGGGGCTCACACGGATAGTCCTTGTCTCAAACTCAAGCCTGTCACCAAGGTTGTTAAGGCTGGGATTTTGGAGGTTGGTGTCCAAACCTATGGAGGAGGCTTGTGGCACACATGGTTTGATCGAGACTTGACCGTGGCGGGGAGGGTCATTGTGCAGGAAGAGAATGCCGGTTCTGTTTCGTACTCGCATCGCCTTGTTAGAATAGAGGAACCTATAATGCGGATCCCGACTTTGGCAATTCACTTGGACAAGACTGTTAGTGATGGATTCAAATTTAACAACGAGACTCACCTTATTCCCATCTTGGCAACATCACTGAAGGGTGAGCTCAATAAAGTGTCCACTGAAAATGGTCCTGTTGAAAGTGGAAATCAGAACGATGGAAAGAAAGCAAATGATAAAACAGGCACCAGCAATACGAAGCACCACCTTCTTCTTCTACAGTTGCTTGCAAGTAAGCTTGGGTGTGAACCAGATGACATATGTGATTTTGAATTGCAAGCTTGTGATACACAACCAAGTACTATTGCTGGAGCTGCAAAGGAATTCATTTTTTCAGGACGGCTTGATAACCTCTGCATGTCATTTTGCTCGCTGAAGGCATTAATAGATGCTACATCCTCTGACAGCAGTCTTGAGGAAGAGTCAGGGGTTAGAATGGTGGCTTTATTTGATCACGAGGAAGTTGGATCTAACTCTGCACAAGGAGCTGGCTCTCCTGTTATGCTAAATGCTGTGACAAGGGTTACCAATTCCTTCAGCTCAAATCCCAACCTTCTGGAGAAAGCAGTACAATTAAGCTACCTTGTATCTGCCGATATGGCACATGCACTACACCCAAATTACATGGAAAAGCATGAAGCAAACCATCAGCCCAAACTACATGGAGGACTTGTCATTAAAACCAACGCTAACCAACGCTATGCAACCAATGTTGTCACATCCTTCATATTCAGGGAGATAGCATCAAAACATAAACTTCCCGTTCAGGACTTTGTGGTGCGCAATGACATGGGTTGTGGTTCAACCATTGGTCCTATTCTTGCTAGTGGCATAGGTATTCGCACTGTTGATGTAGGTGCACCGCAGTTGTCAATGCATAGCATACGAGAAATTTGTGCTGTTGATGATGTGAAGCATTCATATGAGCATTTCAAGGCATTTTACGAAGAATTTTCTCATGTCGATGGTAAGATGGTCGTGGATATATAG 1464 0.4624 MAAELDSHAVASDMIDFLNASPTAFHAVDEAKRRLRSAGYHQLSEREPWKLQPGNKYFFTRNHSTIVAFAIGKKYVSGNGFHIIGAHTDSPCLKLKPVTKVVKAGILEVGVQTYGGGLWHTWFDRDLTVAGRVIVQEENAGSVSYSHRLVRIEEPIMRIPTLAIHLDKTVSDGFKFNNETHLIPILATSLKGELNKVSTENGPVESGNQNDGKKANDKTGTSNTKHHLLLLQLLASKLGCEPDDICDFELQACDTQPSTIAGAAKEFIFSGRLDNLCMSFCSLKALIDATSSDSSLEEESGVRMVALFDHEEVGSNSAQGAGSPVMLNAVTRVTNSFSSNPNLLEKAVQLSYLVSADMAHALHPNYMEKHEANHQPKLHGGLVIKTNANQRYATNVVTSFIFREIASKHKLPVQDFVVRNDMGCGSTIGPILASGIGIRTVDVGAPQLSMHSIREICAVDDVKHSYEHFKAFYEEFSHVDGKMVVDI 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01880 487 CDD M18_DAP 11 474 - -
Gma04g01880 487 Gene3D Zn peptidases 14 472 - -
Gma04g01880 487 PANTHER ASPARTYL AMINOPEPTIDASE 6 486 - -
Gma04g01880 487 Pfam Aminopeptidase I zinc metalloprotease (M18) 17 473 IPR001948 GO:0004177|GO:0006508|GO:0008270
Gma04g01880 487 PANTHER ASPARTYL AMINOPEPTIDASE 6 486 IPR001948 GO:0004177|GO:0006508|GO:0008270
Gma04g01880 487 SUPERFAMILY Zn-dependent exopeptidases 9 474 - -
Gma04g01880 487 Gene3D Aminopeptidase i, Domain 2 91 256 IPR023358 GO:0004177
Gma04g01880 487 MobiDBLite consensus disorder prediction 197 221 - -
Gma04g01880 487 SUPERFAMILY Aminopeptidase/glucanase lid domain 93 251 - -
Gma04g01880 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 81 97 IPR001948 GO:0004177|GO:0006508|GO:0008270
Gma04g01880 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 114 134 IPR001948 GO:0004177|GO:0006508|GO:0008270
Gma04g01880 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 308 326 IPR001948 GO:0004177|GO:0006508|GO:0008270
Gma04g01880 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 351 367 IPR001948 GO:0004177|GO:0006508|GO:0008270
Gma04g01880 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 440 455 IPR001948 GO:0004177|GO:0006508|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01880 Gma-Chr4 49036721 49046654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01880 K01267 - gmx:100776903 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01880 04 49036721 49046654 Gma04g01880 04 49036721 49046654 ECH
Gma04g01880 04 49036721 49046654 Gma06g01530 06 14755693 14762716 GST