Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01871 ATGAACACTAGCAAACTCAGTGACACCCAAGTTGTTTCTGTGAAGCAAGAAAGAAAAATCAACTTAAGATGGAGAAACAAGAAAACAAAGGTTTTAAAAGATGTGATGGAAAGTGATTTTTGGAGCAATGTTCCCCAGCGATTGCGAACAAAGAGGAAGAGTAAATTCAATGGcaaggaagcactttctacacccaaggaagcactttctagacccaaagaaaAGCTAAACAGTGGAGATTTTGATATTTACTTGAAGAAAATATGGAAGATTTTCTCAGGAGATAGGTTGAGGCACTTTACATGCTTTGACAGCTTATGGTTTAGTCTTTACAGGGCCGCTCCATCTAAAGACAAGGTGCTTACTTGGATTAAAAAGGAACCTATTTTCTCCAAGTCATATGTTTTTGTTCCTATAGTCTGCTGGGGTCATTGGAGCCTTTTGATCCTGTGCCATTTTGGTGAAAGCTTGGAATCAACCACCAAATCACGATGCATGTTGTTGCTGGATTCTCTTGAAATGACCAATCCTAGACGGCTCGAACCCGAGATTAGAAGATTTGTATTAGATATTTATAAAACAGAGGACAGACCTGAGGCTAAGCATCTTGTATCTCAAATTCCTTTTTTGGTGCCCAAGGTGCCACAACAAAGAGATGGTAATGAATGTGGATTTTTCATCCTCTATTTCATTAATTTGTTTTTGGAGCATGCACCTGATAATTTTAGCATGGAGGGATATCCTTACTTTATGAAAAAAGATTGGTTTAGCTTTGAAGACCTGGATAGATTTTATGAGAGACTTGATTCACTGAATTAG 819 0.3541 MNTSKLSDTQVVSVKQERKINLRWRNKKTKVLKDVMESDFWSNVPQRLRTKRKSKFNGKEALSTPKEALSRPKEKLNSGDFDIYLKKIWKIFSGDRLRHFTCFDSLWFSLYRAAPSKDKVLTWIKKEPIFSKSYVFVPIVCWGHWSLLILCHFGESLESTTKSRCMLLLDSLEMTNPRRLEPEIRRFVLDIYKTEDRPEAKHLVSQIPFLVPKVPQQRDGNECGFFILYFINLFLEHAPDNFSMEGYPYFMKKDWFSFEDLDRFYERLDSLN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01871 272 Gene3D - 71 263 - -
Gma04g01871 272 PANTHER CYSTEINE PROTEINASES SUPERFAMILY PROTEIN 23 271 - -
Gma04g01871 272 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 23 271 - -
Gma04g01871 272 SUPERFAMILY Cysteine proteinases 69 250 IPR038765 -
Gma04g01871 272 ProSiteProfiles Ubiquitin-like protease family profile. 60 234 IPR003653 GO:0006508|GO:0008234
Gma04g01871 272 Gene3D - 100 211 - -
Gma04g01871 272 Pfam Ulp1 protease family, C-terminal catalytic domain 119 259 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01871 Gma-Chr4 48929078 48930995 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01871 - - gmx:100780621 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01871 04 48929078 48930995 Gma04g01871 04 48929078 48930995 ECH