Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01857 ATGGCAGCTTCAAGTAGCATCATCTCCATCTCCTCTGCTTCACTCTTCACTCCAAAAATCCAATGCCTCCCCAAACACAACAAGGACCATGATCATGTTCCAATTCCATCATCATCATCCTTCACAACACATGCTTCTCTCAAGATATCAAGACCAACAACAACGTTTGGAATCACCACAACAACCACAAGGCTTAATTTTCCTCCTCGTAGGTTGAGTTGTTCAGCATCAGCTTCTTCCTCTTCCACTCTTCCCTCGGCTCTTCTATTTGACTGTGATGGAGTCCTTGTGGATACTGAGAAAGATGGCCATCGCATATCTTTCAACCAAACCTTCCAAGAGAGAGAACTAGGTGTTACCTGGGACGTGGACTTGTACGGGGAATTGCTGAAAATTGGAGGCGGAAAAGAAAGGATGACAGCATACTTTAACAAGGTGGGTTGGCCTGCGAATGCCCCAACAGGTGAACAAGAAAGAAAAGAATTCATAGCTTCACTCCACAAACAAAAGACAGAACTATTTATGGCCCTTATAGAGAAAAAACTGTTGCCTCTTCGTCCAGGTGTTGCAAAGATTATCGATCAGGCTTTTGCTCAAGGAGTCCAAGTTGCAGTTTGCAGCACTTCCAACGAGAAGGCGGTCTCTGCAATAGTATCATTCTTGCTGGGACCTGAGAGAGCAGAAAAAATCAAGATATTTGCAGGAGACGTGGTTCCCCGTAAAAAGCCTGATCCTGCCATCTACCTATTAGCAGCCAGCACTCTGAATGTTGAACCTTCAAGATGTGTTGTGGTGGAGGACAGTGCCATAGGCTTAGCAGCTGCTAAAGCAGCTGGAATGGCGTGTATAGTAACAAAGAGCGGCTATACAGCAGATGAAGATTTCTTAAATGCAGATGCAGTCTTTGACTGCATTGGTGATCCTCCTGAGGAGAGATTTGACTTGGCATTCTGTGGAAGCCTTCTTGAGAAGCAATACGTGAGCTAG 987 0.4519 MAASSSIISISSASLFTPKIQCLPKHNKDHDHVPIPSSSSFTTHASLKISRPTTTFGITTTTTRLNFPPRRLSCSASASSSSTLPSALLFDCDGVLVDTEKDGHRISFNQTFQERELGVTWDVDLYGELLKIGGGKERMTAYFNKVGWPANAPTGEQERKEFIASLHKQKTELFMALIEKKLLPLRPGVAKIIDQAFAQGVQVAVCSTSNEKAVSAIVSFLLGPERAEKIKIFAGDVVPRKKPDPAIYLLAASTLNVEPSRCVVVEDSAIGLAAAKAAGMACIVTKSGYTADEDFLNADAVFDCIGDPPEERFDLAFCGSLLEKQYVS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01857 328 Gene3D Putative phosphatase; domain 2 99 183 IPR023198 -
Gma04g01857 328 Gene3D - 87 304 IPR023214 -
Gma04g01857 328 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 83 311 - -
Gma04g01857 328 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 167 284 IPR006439 -
Gma04g01857 328 Pfam Haloacid dehalogenase-like hydrolase 88 284 IPR041492 -
Gma04g01857 328 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 55 327 IPR044999 GO:0016787
Gma04g01857 328 SFLD phosphoglycolate phosphatase 83 311 - -
Gma04g01857 328 CDD HAD_CbbY-like 90 287 - -
Gma04g01857 328 PANTHER CBBY-LIKE PROTEIN 55 327 - -
Gma04g01857 328 SUPERFAMILY HAD-like 86 307 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01857 Gma-Chr4 48713221 48718174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01857 - - gmx:100816266 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01857 04 48713221 48718174 Gma04g01857 04 48713221 48718174 ECH
Gma04g01857 04 48713221 48718174 Gma06g01552 06 15067723 15072723 GST