Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01807 ATGGACGCAGATTCTGAATATCGTGAAAATAGTGATTCTTCATTTGTTTGGGATGAGAATTCACAACTTTACTTCCACGCCAGTAGTGGATTCTACCATGACCCTAATGCTGGCTGGTACTATAGCAACAAAGATGGTGCTTATTACAAATTTGAGGATGGGAATTATGTGCTTTTAGGTACCAAAGAGGATGATAATGTAGAAATGTATCAGTGCAAGGAAACTACAAAAGAAAATCCTCAACAAATATATGATGGTAACAACAATGAGGATCACCCTTCCTTCCTTGAAAGTAAATTTGAAACTAACCAACAGATAGGAACCCTGGCTGATGAAGCGCCTGCTGATACCCCAAATTCCGTGAGTAGTCCAACTTGTGAAGATCCTCCTCCACCACCATCAGAATGGTTAGAGGACACGCTTATCGATCTTTACTTATCTGGCTACAAGAACATAGAAGTTAGTGAAGCCGATGCAGTGACAGTGCCATTTGAAACAGATGATAGATATAACTCGTTAGCAGCTGATGCTTACAGCAAAACTTACGAAGTGGAAGGCGAGTGGATCCTAGAACCAGGAGATGAAAATGGCTTAGCTGATAATAGAAGTACTGTGGATGAAGGTATACCTTATAGCAACACTTATGAACTGGAAGAAGGTGAATGGATCCCAGACATGGAGGACGAATATGGCATAGCTGATAGAAGTACCATAGATGAAGCCATCTCATTGGATGAAGAGAAATGGCGAGCTCAATATGGTCAAGTTACTGAATCAGGGAAAGATCTGGTTTCAGAGGTTCCAATTGTGGACTTGTGGGATTGGGAAATGGTTACGGGATCCAAAAGAGATGGAAAAGATAAGATGGCAAGGTTGGTTGGTAGACTGGTTAAACCATCTGCAAAGCAACATCCATCTATCCCTTTCAGTGGAGGGAAATTAAGATCTGCTCCCATCTGTGAAGCACATCTCGATCTGGTACGAGTTAAAACAGGACAATTGTACAGATTGCGAAATCCTAGCGCAAAATATGTGGCTTCATTATCAACTTATGATTCTTCCAATCCAACAGAACATTGGGATTTTCCCCAGTTATCACCTAATAGAAAAATCAAACGTCACTCTAAGTCCAGTGAAAGCTCTGCTTCAGCTTTGGATGAAACCCCTATTGAGAAGGATTTGTCTGCATTGCCAAGTCAGCTCTCTGCCTCTAAGAAAATAAAACATCAATACAGAGATAGGGCTGCTGAAAGAAGAATATTGCATGGTGGCTTCGGCATGGGTCCAGGACAGAAGAATCTGTCGGACATTTATAATACACCATCTTCACCTGTTGATGATTGTCCACAAGAAGCTACGGCAGAGGCCTTGGAGATGTCATTTGGAGCTGGTAGTTATGCTAGAAAACTTCTAAAAAGCATGGGTTGGAAGGAGGGGGAAGGGCTTGGCAGTTCTACGAAGGGCTTGGTAGAACCTATTCAACCAGTTGGAAACGTTGGTACTTCTGGTTTGGGATGGTCTCGTTGA 1527 0.4217 MDADSEYRENSDSSFVWDENSQLYFHASSGFYHDPNAGWYYSNKDGAYYKFEDGNYVLLGTKEDDNVEMYQCKETTKENPQQIYDGNNNEDHPSFLESKFETNQQIGTLADEAPADTPNSVSSPTCEDPPPPPSEWLEDTLIDLYLSGYKNIEVSEADAVTVPFETDDRYNSLAADAYSKTYEVEGEWILEPGDENGLADNRSTVDEGIPYSNTYELEEGEWIPDMEDEYGIADRSTIDEAISLDEEKWRAQYGQVTESGKDLVSEVPIVDLWDWEMVTGSKRDGKDKMARLVGRLVKPSAKQHPSIPFSGGKLRSAPICEAHLDLVRVKTGQLYRLRNPSAKYVASLSTYDSSNPTEHWDFPQLSPNRKIKRHSKSSESSASALDETPIEKDLSALPSQLSASKKIKHQYRDRAAERRILHGGFGMGPGQKNLSDIYNTPSSPVDDCPQEATAEALEMSFGAGSYARKLLKSMGWKEGEGLGSSTKGLVEPIQPVGNVGTSGLGWSR 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01807 508 PANTHER RNA-BINDING PROTEIN 8 506 - -
Gma04g01807 508 CDD OCRE 13 54 - -
Gma04g01807 508 MobiDBLite consensus disorder prediction 111 134 - -
Gma04g01807 508 ProSiteProfiles G-patch domain profile. 463 508 IPR000467 GO:0003676
Gma04g01807 508 MobiDBLite consensus disorder prediction 365 380 - -
Gma04g01807 508 Pfam OCRE domain 12 53 IPR041591 -
Gma04g01807 508 Pfam G-patch domain 465 505 IPR000467 GO:0003676
Gma04g01807 508 SMART G-patch_5 461 507 IPR000467 GO:0003676
Gma04g01807 508 PANTHER D111/G-PATCH DOMAIN-CONTAINING PROTEIN 8 506 - -
Gma04g01807 508 MobiDBLite consensus disorder prediction 351 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01807 Gma-Chr4 48121235 48125390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01807 - - gmx:100806477 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01807 04 48121235 48125390 Gma04g01807 04 48121235 48125390 ECH
Gma04g01807 04 48121235 48125390 Gma06g01601 06 15599996 15604062 GST