Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01789 ATGAATGCGCGAGGCGAGGTCGGTTCACCGGATCCGTTGGATTCGTTCCCTCCGTTACGGGTTCGGGGATCGGACGGTGCCTCGGACGATTCCGAGTTCGAGCGGTATTGCAGCGCCAACTCGGTGATGGGGACGCCCAGCACCAGCATGAGCCTCTGCAGCGCCGTTACGCTCTTCCACGAATTCTCCGATTGCGATTTCGCTTCTGCCGGCGGCGAGGGTTTCGAGAATTTCAGTTTGGGAAAAGGAGCCGCGGAGGTGAATCGCGGCGGCGGCGGCGACCGGAGGCGGAGTTTGCGGTACGGTTCCAGTGGATTGGAGATGTACGGTGATTGCAGTGAGGAGCTCTCTATGACAGCGCTCGATTCGTCGGAGTTTATCGGGCTTAATCATCGGATCGAAGAGTCGAAAGGGAACGGTGAAGTGAGTGGTGGAAATGGTTTTGAATTGGAAATTGAGAAAAGAgaagaagaagaagtggaagaagaaaaggaggaggaggaagaaaaggaggaggaggaagaagaggagTTATCGGAGGGTGATGATTCTATGTATGACTATGGTAGTGATGGTGATGGTGGAAATGAAATGTATTTGTGGAAAAATAAAGGTTATTTTGAGGAGCCGGAAGTGAGAAACGAGAACTCTTTGTTTATGAATTCTTCCGTGGCATTTGGATCGCGAGACCTGGATGATTTTTTGTTGCAGAGTGGTGACATTTCTGTCATGCCTGATCTGTTTCAGAATCAGCGAAAAAAGAATGATGGAGTGAATATGGGTTCTGGTCGAAATGAGGAAGGGAAAGATGAAAAGTACGTGGTCAGAGGCAATGAAGTTGAAGAAACTAAAGATGTTGGTTATTTTGATTCTGTAGAGGAGGTTAGGGATAGCGAAATTTCTGCAGATTGCGATCATGTTCGAGATTCTGATATGCTTGCTAACATAGTGGAAAGTTCTCCCTCAATAGATTGTCGGAACCATGTTGAACCGCAGGTCCAAGGTTCTGATGATTTGGTTAGTTGTCCTGAAACTTCGTCTATTGTCAAGGTCGATGAAGTTGATTTGGATATGCTGGCGAAAGAAGCTCCTCCTCGGAATATGGGTTTGGATGTTAATGATGGTGGTAGCATGGAAAAGGGGAATATCAACAGTGAAGAAGCTATTGCCGCTTGTGATGCTCATGGTTTAAAGTCAGAGTTGGATGATTCTAAGTTCAATCTTGATTGCCTTAGTGCTAGCCGATTTGATAGAAGTTCTTCCATTCCATCCAACCATCTTGGGAATGTTAACGCAAAATCATTTGAGAGTCTTGAGCAAATTGAGCCAGTGTTGGACTATGGAATGAGGAAAACATTAGAGAAGTCTTCCACTTCAACAAATCTTTTAGAAAAAAGTCCTGTGGTATCTAAGACAGAAGACTTTGAGCTAAATGAATTCTATGATGAGGTTGTTCAGGAAATGGAAGAAATTTTACTGGAATCTGTGGATTCTCCTGGGACTAGGCTTTCCATGCGTGACAGATTTGCTGAGCCTCAATTTTCTATGCCTTCAAGAGACGGTGGATTGACTGCTTCTACTTCTAGTAAAGATGATGCTTACCTGCTAGTTCAGTGCCCAAGAAAAATAGATAGGATTGAAGTGGTAGGTGCAAGGCAGAAGAAAGGGGATGTTTCTTTCAGTGAAAGATTAGTTGGAGTGAAGGAATACACTGTGTATAAAATAAAAGTGTGGAGTGGCAAGGATCAGTGGGAGGTTGAAAGGAGATATCGTGATTTCCTCACTCTCTATCGGTACATGAAAACCTTATTCTATGAGCAAGGCTGGAAATTACCTTTGCCATGGTCTTCAGTTGAAAAGGAAACCCAGATATTTAGAAGTGCATCGCCTGATATTATTGTGAAGAGGAGTGTTCTCATTCAAGAGTGTTTACAGTCTATTATCCGTTCCAGGTTTTCTTTAAGTCCTCCCAGAGCATTGATTTGGTTTATATCCCATCAAGATTCATATCCTATTTCACCTGTGTCAAATGCACCAGTGTCTCAGTCTTCTTTTACAAGAGGGGAAAATACCAGAAGCATTTCCAATTTAGGAAAAACAATTTCACTTATAGTTGAAATTCCACCAAACAAATCTGTGAAACAGTTGTTAGAAGCACAACATCACACCTGTGCTGGATGCCATAAGCATTTTGATGATGGAAAAACTTTGATTCGGGATTTTGTACAGACATTTGGATGGGGGAAGCCTCGACTTTGTGAATACACGGGCCAGTTGTTTTGCTCTTCTTGCCACACAAATGAGACCGCAGTCTTGCCAGCCAGGGTTTTACATCATTGGGATTTCACTCACTATCCTGTTTCTCAGCTGGCAAAATCCTATCTGGATTCTATATATGAACAGCCCATGCTTTGTGTCACTGCCGTTAATCCCTTCCTTTTGTCAAAGGTCCCAGCCTTGCTTCATATTATGAGTGTCAGAAAAAAGATAGGTACAATGCTTCCATATGTTCGCTGCCCATTTCGGAGGTCTATCAACAGAGGACTTGGAAACAGGAGATATCTTCTTGAAAGCAATGACTTTTTTGCTCTTAGAGATTTGATTGATCTTTCCAGAGGAGTCTTTGCTGCACTTCCTGTGATGGTGGAAACTTTATCAAGGAAAATCCTGGAACACATTACTGACCAATGCCTTATATGCTGCGATGTGGGAGACCCCTGCAATGCCCGACAAGATTGCAGTGACCCATCTTCACTCATTTTCCCATTTCAGGAAGACGACATTGAAAGGTGCAAAGCTTGTCAGTTGGTGTTCCATAAGCGTTGCTTTAAAAAACTTGCAAACTGTCCATGTGGGGCTCAACTCAGATTGAATGAGACAAGGAGCTTAACTAACAGAGCAAGCCAAAGAGGAGGAGGTGGTGAATCGAGAGGAGCTTTGAACTTGTTAGGCATGGGACTGAGTTCTGGGTTGTCACCTAGGTTCCTCTCTGGATTATTTACGAAAGAAAAGCCAGAGAAGACTAGGGAGCATAAAGACGAAAATATTATTTTGATGGGTTCCTTACCAAGTACCTCTTTATGA 3084 0.4267 MNARGEVGSPDPLDSFPPLRVRGSDGASDDSEFERYCSANSVMGTPSTSMSLCSAVTLFHEFSDCDFASAGGEGFENFSLGKGAAEVNRGGGGDRRRSLRYGSSGLEMYGDCSEELSMTALDSSEFIGLNHRIEESKGNGEVSGGNGFELEIEKREEEEVEEEKEEEEEKEEEEEEELSEGDDSMYDYGSDGDGGNEMYLWKNKGYFEEPEVRNENSLFMNSSVAFGSRDLDDFLLQSGDISVMPDLFQNQRKKNDGVNMGSGRNEEGKDEKYVVRGNEVEETKDVGYFDSVEEVRDSEISADCDHVRDSDMLANIVESSPSIDCRNHVEPQVQGSDDLVSCPETSSIVKVDEVDLDMLAKEAPPRNMGLDVNDGGSMEKGNINSEEAIAACDAHGLKSELDDSKFNLDCLSASRFDRSSSIPSNHLGNVNAKSFESLEQIEPVLDYGMRKTLEKSSTSTNLLEKSPVVSKTEDFELNEFYDEVVQEMEEILLESVDSPGTRLSMRDRFAEPQFSMPSRDGGLTASTSSKDDAYLLVQCPRKIDRIEVVGARQKKGDVSFSERLVGVKEYTVYKIKVWSGKDQWEVERRYRDFLTLYRYMKTLFYEQGWKLPLPWSSVEKETQIFRSASPDIIVKRSVLIQECLQSIIRSRFSLSPPRALIWFISHQDSYPISPVSNAPVSQSSFTRGENTRSISNLGKTISLIVEIPPNKSVKQLLEAQHHTCAGCHKHFDDGKTLIRDFVQTFGWGKPRLCEYTGQLFCSSCHTNETAVLPARVLHHWDFTHYPVSQLAKSYLDSIYEQPMLCVTAVNPFLLSKVPALLHIMSVRKKIGTMLPYVRCPFRRSINRGLGNRRYLLESNDFFALRDLIDLSRGVFAALPVMVETLSRKILEHITDQCLICCDVGDPCNARQDCSDPSSLIFPFQEDDIERCKACQLVFHKRCFKKLANCPCGAQLRLNETRSLTNRASQRGGGGESRGALNLLGMGLSSGLSPRFLSGLFTKEKPEKTREHKDENIILMGSLPSTSL 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01789 1027 Coils Coil 148 184 - -
Gma04g01789 1027 Pfam PX domain 578 665 IPR001683 GO:0035091
Gma04g01789 1027 SUPERFAMILY PX domain 563 668 IPR036871 GO:0035091
Gma04g01789 1027 CDD PX_domain 558 649 - -
Gma04g01789 1027 MobiDBLite consensus disorder prediction 154 187 - -
Gma04g01789 1027 Gene3D - 556 661 IPR036871 GO:0035091
Gma04g01789 1027 PANTHER DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG 43 1027 - -
Gma04g01789 1027 MobiDBLite consensus disorder prediction 1 31 - -
Gma04g01789 1027 ProSiteProfiles PX domain profile. 551 670 IPR001683 GO:0035091
Gma04g01789 1027 MobiDBLite consensus disorder prediction 136 193 - -
Gma04g01789 1027 SMART DUF4206_2 751 958 IPR025258 -
Gma04g01789 1027 Pfam Putative zinc-RING and/or ribbon 751 954 IPR025258 -
Gma04g01789 1027 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 43 1027 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01789 Gma-Chr4 47858380 47867853 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01789 - - gmx:100800081 1973.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01789 04 47858380 47867853 Gma04g01789 04 47858380 47867853 ECH
Gma04g01789 04 47858380 47867853 Gma06g01612 06 15821077 15828583 GST