Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01690 ATGGCTGAATCAGCAAACTCAATCCACAACAGTGGCCAGAAAAAGTTAGCCGGCAAAGTTGCCATAATCACCGGCGGAGCCAGCGGCATCGGCGAAGAGACGGCGCGTCTGTTTGCTCACCATGGTGCACGAATGGTTGTGATTGCAGACATCCAAGATGACCTGGGTATCCAAGTAGCAGCATCCATTGGCTCTCACAGGTGCAGCTATGTCCGTTGTGACGTGACAGACGAAGACCAAGTCAAAAACCTCGTGGATTCCACGGTCAACGCTCACGGCCAGCTGGACATCATGTTCAGCAACGCGGGCATCCTCAGTCCCTCCGACCAGACAATCCTCGACCTCGACTTCTCCGCGTACGACCGTCTCCTCGCCGTGAACGCGCGGGGCACGGCAGCGTGCGTGAAGCACGCAGCGCGGTCGATGGTGGAGCGGCGCGTGAGGGGCAGCATTGTGTGCACGGCGAGCGTGTCAGCGTCGCACGGCGGCCTGCGGCGAACCGACTACGTGATGTCGAAGCACGCGGTGAAGGGGCTCATGCGCGCGGCCAGCGCGCAGCTTGGAGCGCATGGTGTTAGGGTGAACTGCGTCTCGCCGAGTGGGTTGACCACGCCGCTGACACGTGCCGCGCATGCCGCGATGGAGACGAAGGAGTTGCAGAAGCAGTACGCGCAGAGCTCTAGGTTGAAAGGTGTCTTTTTGACGCCGAAGCATGTCGCGGATGCGGTGCTGTTTCTTGCGTGCGGTGACTCCGAGTTTGTAACCGGACACGATCTTGTGGTGGACGGTTGTTTTGACGGTGTTTAG 807 0.5973 MAESANSIHNSGQKKLAGKVAIITGGASGIGEETARLFAHHGARMVVIADIQDDLGIQVAASIGSHRCSYVRCDVTDEDQVKNLVDSTVNAHGQLDIMFSNAGILSPSDQTILDLDFSAYDRLLAVNARGTAACVKHAARSMVERRVRGSIVCTASVSASHGGLRRTDYVMSKHAVKGLMRAASAQLGAHGVRVNCVSPSGLTTPLTRAAHAAMETKELQKQYAQSSRLKGVFLTPKHVADAVLFLACGDSEFVTGHDLVVDGCFDGV 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01690 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 IPR002347 -
Gma04g01690 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 IPR002347 -
Gma04g01690 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 IPR002347 -
Gma04g01690 268 Gene3D - 5 266 - -
Gma04g01690 268 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Gma04g01690 268 PRINTS Glucose/ribitol dehydrogenase family signature 93 104 IPR002347 -
Gma04g01690 268 PRINTS Glucose/ribitol dehydrogenase family signature 143 159 IPR002347 -
Gma04g01690 268 PRINTS Glucose/ribitol dehydrogenase family signature 169 188 IPR002347 -
Gma04g01690 268 PRINTS Glucose/ribitol dehydrogenase family signature 190 207 IPR002347 -
Gma04g01690 268 PRINTS Glucose/ribitol dehydrogenase family signature 229 249 IPR002347 -
Gma04g01690 268 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 156 184 IPR020904 GO:0016491
Gma04g01690 268 Pfam Enoyl-(Acyl carrier protein) reductase 25 263 - -
Gma04g01690 268 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B-LIKE 13 265 - -
Gma04g01690 268 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 263 IPR036291 -
Gma04g01690 268 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 13 265 - -
Gma04g01690 268 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 19 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01690 Gma-Chr4 45926916 45930421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01690 15 262 Acyl Lipid Metabolism Gene Families AT1G63380 26.820 1.75e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01690 - - gmx:100817513 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01690 04 45926916 45930421 Gma04g01690 04 45926916 45930421 ECH