Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01662 ATGTTTTTGTCAAGAACACTTGGACGAACACTATTTGCTGCAGCTGCCAGATCAAAACAATATGCCACTACAGCAGCTGCTGCTGCTGGCAGAGAAGGACACAACCCCCTTCAGGAGTTCTTTGAGGCAGACAGGAGCCCTGATGATGACAAACCTGTTGTTTATGGTCGGAGTTGGAAGGCGTCTGAACTGCGTCTGAAGTCTTGGGACGACCTTCATAAGTTGTGGTATGTGTTGTTAAAGGAAAAGAACATGTTGATGACTCAACGTCAAATGCTTAATGCACAGAACCTGCGTTTTCCTAACCCGGAGCGCATCCCTAAGGTGAGGAAGTCAATGTGTCGCATCAAGCATGTACTTACTGAGAGAGCAATTGAAGAACCAGATCCCAGGAGGTCTGCTGAGATGAAAAGAATGATAAATGCTCTTTGA 432 0.4606 MFLSRTLGRTLFAAAARSKQYATTAAAAAGREGHNPLQEFFEADRSPDDDKPVVYGRSWKASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKHVLTERAIEEPDPRRSAEMKRMINAL 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01662 143 Coils Coil 133 143 - -
Gma04g01662 143 CDD Ribosomal_L29_HIP 62 123 - -
Gma04g01662 143 Gene3D - 31 133 IPR038340 -
Gma04g01662 143 PANTHER RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED 1 143 IPR010729 GO:0003735|GO:0005761|GO:0006412
Gma04g01662 143 TIGRFAM L29: ribosomal protein uL29 63 123 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gma04g01662 143 SUPERFAMILY Ribosomal protein L29 (L29p) 59 126 IPR036049 GO:0003735|GO:0005840|GO:0006412
Gma04g01662 143 Pfam Mitochondrial 39-S ribosomal protein L47 (MRP-L47) 37 123 IPR010729 GO:0003735|GO:0005761|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01662 Gma-Chr4 45132618 45135313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01662 K17428 - gmx:100812176 277.33