Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01588 ATGTTTGGTTCAAAGAAAACTCCTCTGAGAGATGCTAAACCTACCTCTGTTGACCATGCCCATAACCCCTTTGATTCTGATGAAGATACAAAAGATAACAAGTATAATTCTTCTAAGAAGACTTTGACCAACACCAACCCCTTTGATGATGATCATGTTAATGCCACTGGCCACTCTTCATCATCTTCTTATGGCCTTTCGTCTACCCATCGAAATAGGTATAAGAACGATTTCCGCGACTCAGGGGGGTTGGAGAGTCAATCTGTGCAGGAATTGGAGAACTATGCTGTTTACAAGGCTGAAGAGACGACAAATTCAGTGAACAGTTGTTTAAAGATAGCTGAGGAAATGAGAGAGGATGCTACCAAGACTTTGGTGATGCTGCACCAACAGGGTGAGCAGATTACAAGGAGTCACCATGTTGCTGCTGATATTGATCACGATTTGAGTCGGGGAGAAAAGCTGTTGGGAAGTCTTGGTGGCATGTTCTCCAAAACTTGGAAACCTAAGAAGACAGGCACGATAACTGGCCCTGTTGTTTTTGGAGAGGATCCAGTGAGAAAGAAGGGCAACCACTTGGAGCAAAGAGAGAAGTTAGGATTGACTTCTGCCCCTAAAGGGCAGTCAAAGTCACGTACAACACTTTCTGAGCCATCAAATGTGCTTGAAAAAGTTGAGGTTGAAAAAGGGAAGCAAGATGATGCACTGTCAGATTTAAGTGATCTCTTGGGAGAACTGAAAGGCATGGCCATTGACATGGGATCTGAAATTGGGAGCCAAAACCAAGCCTTGGATGGTTTTGACAATGATATGGAGAAGTTGATCGTCCGCGTGAATGGTGCTAATCAACGTGGTCGTCGTTTGCTTGGGAAATAG 876 0.4406 MFGSKKTPLRDAKPTSVDHAHNPFDSDEDTKDNKYNSSKKTLTNTNPFDDDHVNATGHSSSSSYGLSSTHRNRYKNDFRDSGGLESQSVQELENYAVYKAEETTNSVNSCLKIAEEMREDATKTLVMLHQQGEQITRSHHVAADIDHDLSRGEKLLGSLGGMFSKTWKPKKTGTITGPVVFGEDPVRKKGNHLEQREKLGLTSAPKGQSKSRTTLSEPSNVLEKVEVEKGKQDDALSDLSDLLGELKGMAIDMGSEIGSQNQALDGFDNDMEKLIVRVNGANQRGRRLLGK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01588 291 MobiDBLite consensus disorder prediction 37 71 - -
Gma04g01588 291 Gene3D - 223 290 - -
Gma04g01588 291 MobiDBLite consensus disorder prediction 11 36 - -
Gma04g01588 291 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 226 288 IPR000727 -
Gma04g01588 291 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 1 291 - -
Gma04g01588 291 SUPERFAMILY SNARE fusion complex 229 289 - -
Gma04g01588 291 Gene3D - 83 161 - -
Gma04g01588 291 SMART tSNARE_6 221 288 IPR000727 -
Gma04g01588 291 SMART tSNARE_6 92 159 IPR000727 -
Gma04g01588 291 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 291 - -
Gma04g01588 291 MobiDBLite consensus disorder prediction 1 86 - -
Gma04g01588 291 CDD SNARE_Qc 231 287 - -
Gma04g01588 291 SUPERFAMILY SNARE fusion complex 87 157 - -
Gma04g01588 291 MobiDBLite consensus disorder prediction 202 219 - -
Gma04g01588 291 CDD SNARE_SNAP25N_23N_29N_SEC9N 94 158 IPR044766 GO:0005484|GO:0031201
Gma04g01588 291 MobiDBLite consensus disorder prediction 199 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01588 Gma-Chr4 43204954 43206847 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01588 K18211 - gmx:100794076 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01588 04 43204954 43206847 Gma04g01588 04 43204954 43206847 ECH