Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01584 ATGGGTTGTTTCGCCAGCAAAAACGCTGACACCAAGGCCAGTAGGGCTGCGCGTTGGCGATCCACGGGCATTGTTGCTTTGCGCGATTCCAAATTAAAGACGTTTCCGGATGAAATTCTTGAGTTAGACACATCTGTTCGCACTCTTGACTTGACGCATAATCGGATAGTTGACATTCCGGTGGAAATCAGCAAATTAATTAATGTACAGCGCCTGATATTAGCGGAGAACCTCATTGAGAGACTGCCAGTGAATTTGGGGAAACTCCAATCTCTGAAACTGATGAACCTGGATGGAAATCGAATTACTTCCTTGCCTGATGAATTGGGCCAGTTAGTAAGGCTGGAACGCATATCCATCTCAGGGAATTTGTTAACATCCTTGCCAGCAACCATTGGAAGTTTGAGAAATCTGGTGCTTTTAAATGTGTCAAATAACAAGTTACAGTCTCTTCCAGAATCTGTTGGGAGTTGCTTCTCTTTGGAAGAATTACAAGCTAATGATAATCTTATTGAAGATCTTCCCTCTTTGGTGTGCAATCTTTCTCACTTGAAGTCACTTTGCTTGGATAACAATAATGTGAAGCAGATACCTCTGAATTTATTGAAAGACTGCATTGCTCTTCAGAACATATCACTGCATGGTAATCCTATATCAATGGATCAATTTCAGCAGATGGAGGGGTTTCAAGAGTTTGAAGCAAGGAGGAAAAAGAAGTTTGACAAACAAATTGATTCAAATGTGATGATCGGTTCCAAAGGTCTTGATGAGGGTGTTGATCTATGA 786 0.4135 MGCFASKNADTKASRAARWRSTGIVALRDSKLKTFPDEILELDTSVRTLDLTHNRIVDIPVEISKLINVQRLILAENLIERLPVNLGKLQSLKLMNLDGNRITSLPDELGQLVRLERISISGNLLTSLPATIGSLRNLVLLNVSNNKLQSLPESVGSCFSLEELQANDNLIEDLPSLVCNLSHLKSLCLDNNNVKQIPLNLLKDCIALQNISLHGNPISMDQFQQMEGFQEFEARRKKKFDKQIDSNVMIGSKGLDEGVDL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01584 261 Pfam Leucine rich repeat 45 102 IPR001611 GO:0005515
Gma04g01584 261 Gene3D Ribonuclease Inhibitor 5 243 IPR032675 -
Gma04g01584 261 ProSiteProfiles Leucine-rich repeat profile. 160 181 IPR001611 GO:0005515
Gma04g01584 261 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN-RELATED 2 253 - -
Gma04g01584 261 ProSiteProfiles Leucine-rich repeat profile. 183 203 IPR001611 GO:0005515
Gma04g01584 261 PANTHER LEUCINE-RICH REPEAT-CONTAINING 2 253 - -
Gma04g01584 261 ProSiteProfiles Leucine-rich repeat profile. 91 112 IPR001611 GO:0005515
Gma04g01584 261 SUPERFAMILY L domain-like 24 221 - -
Gma04g01584 261 ProSiteProfiles Leucine-rich repeat profile. 137 158 IPR001611 GO:0005515
Gma04g01584 261 SMART LRR_typ_2 44 65 IPR003591 -
Gma04g01584 261 SMART LRR_typ_2 66 88 IPR003591 -
Gma04g01584 261 SMART LRR_typ_2 112 134 IPR003591 -
Gma04g01584 261 SMART LRR_typ_2 181 204 IPR003591 -
Gma04g01584 261 SMART LRR_typ_2 135 158 IPR003591 -
Gma04g01584 261 SMART LRR_typ_2 89 111 IPR003591 -
Gma04g01584 261 SMART LRR_bac_2 160 177 - -
Gma04g01584 261 SMART LRR_bac_2 89 108 - -
Gma04g01584 261 SMART LRR_bac_2 181 200 - -
Gma04g01584 261 SMART LRR_bac_2 112 131 - -
Gma04g01584 261 SMART LRR_bac_2 135 154 - -
Gma04g01584 261 ProSiteProfiles Leucine-rich repeat profile. 45 66 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01584 Gma-Chr4 43035693 43044134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01584 36 221 Receptor kinase-like Gene Family AT3G47570 31.771 4.24e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01584 - - gmx:100792498 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01584 04 43035693 43044134 Gma04g01584 04 43035693 43044134 ECH