Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01572 ATGCAGCCACCACCCAAGGAAAATGACAAGGCTGGAGTTTGTGATATATGTGGTGCTAGTGGATTTGATGAAACAATTGTTACTTGTTCTAAATGCAACATAAACTGTGAACATTCTTACTGCATGCGATTTAATACCTTAATAGTTCCTATAGACTGGATTTGTGAGCCTTGCAAATCCAAGGATGTTTCGACTTCACCACATGAAGTGAATCAGGGTATTGGCTTGAGGGCTTCTAAAATGCGACAGCCTGTCAAAACAGGGAAAGTGAAGTTCCTTCCCGAGGATGAAGTCCTTAGACTTTATTCTGGCAATTTTCCCTTGGCAACAACCCGGAAAACTTCTGTTGGGTCCAAAAATGTTGTTTCAAAGATTCCCTCACAGACTCCAAAACCATATCCTTGCATATCACCTCCTAAAGTACTTGGGAAGCTTTCAAGAAATGATGAAGTACACAAGAAGTCAATGACTAATCAACATGCTTCTTGCTCATTATCAAAAGgaccgccaaaggagtgtataggagaaaatcagctacccttggatggagtgatacctggtaaaaaagttcaaacccatgatgctcagaaagaaaatcctacaaaaggggcaccatttgaagctttatcagcaggaaaatcttcccctattgtcgattcagGTGATATCCGCCGTGCTGATGCTGAATGTAACAAATCTAATATTGAAAAAAGTGATCTTCGGAGTGTTCAGGAAAACTTAAACCTTCATTGTAAATTTTTACCCTCTTCATTTCCTGCTTGGAGGGGTCAATTCCAAATTCTTCAGACTGCTGTATCTAGTGAATTTTATGATGGGCTTGAGGCCCAACCACCATGCATTGTTAACAAGAAAGCATACAAATTTTCAACAGAAATGCCATCAGTCCTTCAACTGGAGTCACTTCCTGTGTTGAATGCCTTGACTGACATATTCCAGGATAATTCTCCTAGGCTTCAGGATATTGCATTGTATTTCTTTCCATCAGAACTTACTGAGAGGTCCAGAAAGAACCTGGATAGCATATTGAAGTTTTTGAATGCTGAGAAATCAATGCTGAGAAGTTATATTAATGGAGTAGAGTTGCTGGTATTTACCTCAAATCAACTTGACATGGACTCAAAGGGTGCTATAGCTGCAGTAAATGCTGGACATTTCCTGTGGGGAATGTTTCGCCAAAAGAAAATTGATAAAGCTATTGAAAGAGTGCCTGACATGGAGCCAGTTGATATGGACATCGATATGATTGGAGGAAAGGATGTGGTGGAGAGAGCTGATGTCGTTCGAAATTGTAAACCTAAGAGTGCCTCTTTGATGGAGGATTATAACAAACTGGACGTTCCTCCAGGCTTTGAAGAATTTACCAAAATGTCTAAATGA 1398 0.3526 MQPPPKENDKAGVCDICGASGFDETIVTCSKCNINCEHSYCMRFNTLIVPIDWICEPCKSKDVSTSPHEVNQGIGLRASKMRQPVKTGKVKFLPEDEVLRLYSGNFPLATTRKTSVGSKNVVSKIPSQTPKPYPCISPPKVLGKLSRNDEVHKKSMTNQHASCSLSKGPPKECIGENQLPLDGVIPGKKVQTHDAQKENPTKGAPFEALSAGKSSPIVDSGDIRRADAECNKSNIEKSDLRSVQENLNLHCKFLPSSFPAWRGQFQILQTAVSSEFYDGLEAQPPCIVNKKAYKFSTEMPSVLQLESLPVLNALTDIFQDNSPRLQDIALYFFPSELTERSRKNLDSILKFLNAEKSMLRSYINGVELLVFTSNQLDMDSKGAIAAVNAGHFLWGMFRQKKIDKAIERVPDMEPVDMDIDMIGGKDVVERADVVRNCKPKSASLMEDYNKLDVPPGFEEFTKMSK 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01572 465 PANTHER ZINC ION-BINDING PROTEIN 10 444 - -
Gma04g01572 465 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 81 IPR013083 -
Gma04g01572 465 MobiDBLite consensus disorder prediction 189 211 - -
Gma04g01572 465 PANTHER - 10 444 - -
Gma04g01572 465 SUPERFAMILY FYVE/PHD zinc finger 7 61 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01572 Gma-Chr4 42651789 42657857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01572 - - ccaj:109815968 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01572 04 42651789 42657857 Gma04g01572 04 42651789 42657857 ECH