Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01541 ATGTCTTCGTCATCGGGAAGCACAGCAGCAGCAACGCCGATTCTGAAGGAGGAGGTGGACATAGTGATTCCCACGATACGTAACCTGGACTTCTTGGGGATGTGGAGGCCCTTCTTCGAGGGTTATCATTTGATAATAGTGCAGGACGGTGATCCTTCGAAGGTTATCAAGGTTCCTGAAGGGTTTGATTATGAACTCTACAACCGCAACGACATCAACCGCGTTCTTGGCCCCAGGGCACACTGCATCTCCTTCAAGGACTCTGCTTGCCGCTGCTTCGGCTTCTTGTTGTCTAAGAAAAAGTACATCTTCACCATCGACGATGACTGCTTCGTTGCAAAAGATCCATCCGGAAAAGAAATTAATGCCCTGGAGCAGCACCTTAAGAACCTTCTGAGTCCATCAACCCCATTTTTCTTCAACACCCTCTATGATCCATACAGAGAGGGTACAGATTTTGTCCGAGGATACCCTTTTAGTCTGCGTGAAGGTGTCCCTACAGCTGCTTCTCATGGCCTCTGGCTCAACATTCCTGATTATGATGCCCCAACTCAGCTTGTCAAGCCTCTAGAGAGAAACAATAGGTATGTGGATGCAGTTATGACTATCCCAAAGGGGACTCTCTTTCCCATGTGTGGTATGAATTTGGCATTCAACCGGGAATTGATTGGTCCTGCAATGTACTTTGGACTCATGGGTGAGGGTCAACCTATTGGACGCTATGATGACATGTGGGCAGGCTGGTGCGTCAAGGTGATAAGTGATCACCTAGGATTGGGGGTGAAGACAGGATTGCCTTACATCTGGCACAGCAAAGCTAGCAACCCATTTGTGAACCTCAAGAAGGAGTACAAAGGAATTTACTGGCAAGAAGAGCTGATCCCATTTTTCCAATCTGTTTCTTTTCCAAAGGAATGCACAACTGCTCAGAAATGCTACATTGAACTCTCCAAGCAAGTGAAGGCAAAACTTGGCAAGGTTGATGAGTATTTCAACAAGCTTGCAGATGCTATGGTCACATGGATTGAAGCTTGGGATGAACTAAACCTATCTGGGGTAAAATCTGAAGCATTGTCCAATGGTCCGGCAAAGTAA 1095 0.4676 MSSSSGSTAAATPILKEEVDIVIPTIRNLDFLGMWRPFFEGYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRVLGPRAHCISFKDSACRCFGFLLSKKKYIFTIDDDCFVAKDPSGKEINALEQHLKNLLSPSTPFFFNTLYDPYREGTDFVRGYPFSLREGVPTAASHGLWLNIPDYDAPTQLVKPLERNNRYVDAVMTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGEGQPIGRYDDMWAGWCVKVISDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSVSFPKECTTAQKCYIELSKQVKAKLGKVDEYFNKLADAMVTWIEAWDELNLSGVKSEALSNGPAK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01541 364 PIRSF UPTG 9 353 IPR004901 GO:0016866|GO:0071669
Gma04g01541 364 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 6 355 - -
Gma04g01541 364 SUPERFAMILY Nucleotide-diphospho-sugar transferases 41 250 IPR029044 -
Gma04g01541 364 Pfam Reversibly glycosylated polypeptide 15 349 IPR037595 -
Gma04g01541 364 PANTHER UDP-ARABINOSE MUTASE 6 355 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01541 Gma-Chr4 41776040 41778894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01541 K13379 - gmx:100778301 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01847 06 19745629 19748864 Gma04g01541 04 41776040 41778894 ECH
Gma04g01541 04 41776040 41778894 Gma04g01541 04 41776040 41778894 ECH