Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01456 ATGGCTCCAAATTGCTTGCACCAAGTGGCATTCCTTCTTGTGTTCTTAATTGTGGTTTCCAGTGGCTATGCTTGGGTTGGTGTGAACTGGGGAACCATGGCGACCCACCAGCTTCCGCCCGAGAAGGTGGTCAAGATGCTGAAGGAAAATGGGTTCAGAAAACTGAAGCTGTTTGATGCAGATGAGTTCATTATGGCGGCTCTGATGGGGACCGGTATCGAAGTCATGGTGGCAATACCCAACAACATGTTGGACAAGATAAGCAACAGTCCCAAAGCTGCAGATTCTTGGGTGAATGATAATGTCACCAGCTACTTGTTCACTGGTGGTGTCAAAATCAAGTATGTTGCTGTGGGTAACGAGCCTTTCCTTAAAGCATATAATGGCTCCTTTGCAAAGAAAACTCTGCCAGCACTCAAGAACATACAGACATCACTTAATAAGGCTGGGTTGGGTTCAAAGATCAAAATTACTGTTCCATTCAATGCTGACATTTACTATTCGCCTGATTCAAATCCGGTGCCATCAGCCGGTGACTTTAGGCCTGAAGTGCGAGACCTCACCGTTGAAATAATCCAATTCTTATACGCAAACAATGCACCTTTCACAGTGAATATCTACCCTTTCCTTAGTCTTTATGGCAACGAAGATTTCCCTTTTGATTTTGCATTTTTTGATGGAAACAACAAGCCTCTTAGGGATGGTAAGACACTTTACACCAATGTGTTTGATGCAAATCTTGACACACTTCTGTGGGCTTTAGACAAGGCAGGGTACCCTGACATGGAGGTTATGATTGGAGAAATTGGGTGGCCAACTGATGGTGACAAGAATGCTAATGCCAAGAATGCTAAAAGATTCAACCTTGGTTTGCTTAAACATGCTCTAAGTGGCAAGGGTACCCCTAAAAGGAAAGGCACAATTGACTTGTTTCTATTCAGCCTCATTGATGAGGACACCAAAAGTGTTGCTCCTGGGAATTTTGAGAGGCATTGGGGGATTTTTGAGTTTGATGGCAAGCCAAAGTATGAATTAGACTTAACAGGTCAACATCAGCAAAAGGGTCTTGTCCCAGTGGAAGGTATCAAGTACATGGAAAAGAGGTGGTGTATTTTGGATCCAGATGTTACTAACTTGGATGATTTGGCTGGTAACATTGACTATGCTTGCACTTTTTCTGATTGTACTTCCCTTGGCTATGGCTCTACCTGTAATAATCTTAGTGTCCAAGGGAATGCGTCTTATGCCTTCAATATGTATTATCAAGTGAACAACCAACAGAATTGGGACTGTGATTTCTCTGGTTTGGCTGTCATAACACATAAGGATCCATCACTAAATGGATGCCAATTCCCTGTAATGATCTCTAGTAGTTCTTCTTTGCTACTGCATGGAGGGTTTTCAGACATCCTTAAGAAAGCACTGAGGATCATGCACTACCTCACCGAGCACTGCAACATCGTGGAGCTCAAGGGAGCTTACGAGGACTGCCACTCCCCAACCTCATCATGGAGCTCTATGATGGTGGCAAGCTCTTCGATTAGATCATCACCAAGGGCCACTACTCCGAGCGCGCCGCCGCCAATCTCTGTCGCTAGATCGTGA 1605 0.4442 MAPNCLHQVAFLLVFLIVVSSGYAWVGVNWGTMATHQLPPEKVVKMLKENGFRKLKLFDADEFIMAALMGTGIEVMVAIPNNMLDKISNSPKAADSWVNDNVTSYLFTGGVKIKYVAVGNEPFLKAYNGSFAKKTLPALKNIQTSLNKAGLGSKIKITVPFNADIYYSPDSNPVPSAGDFRPEVRDLTVEIIQFLYANNAPFTVNIYPFLSLYGNEDFPFDFAFFDGNNKPLRDGKTLYTNVFDANLDTLLWALDKAGYPDMEVMIGEIGWPTDGDKNANAKNAKRFNLGLLKHALSGKGTPKRKGTIDLFLFSLIDEDTKSVAPGNFERHWGIFEFDGKPKYELDLTGQHQQKGLVPVEGIKYMEKRWCILDPDVTNLDDLAGNIDYACTFSDCTSLGYGSTCNNLSVQGNASYAFNMYYQVNNQQNWDCDFSGLAVITHKDPSLNGCQFPVMISSSSSLLLHGGFSDILKKALRIMHYLTEHCNIVELKGAYEDCHSPTSSWSSMMVASSSIRSSPRATTPSAPPPISVARS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01456 534 Pfam Glycosyl hydrolases family 17 26 346 IPR000490 GO:0004553|GO:0005975
Gma04g01456 534 Pfam X8 domain 369 437 IPR012946 -
Gma04g01456 534 Gene3D Glycosidases 25 355 - -
Gma04g01456 534 Gene3D - 363 459 - -
Gma04g01456 534 SMART X8_cls 368 451 IPR012946 -
Gma04g01456 534 PANTHER O-GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 6 475 - -
Gma04g01456 534 MobiDBLite consensus disorder prediction 514 534 - -
Gma04g01456 534 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Gma04g01456 534 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 6 475 IPR044965 GO:0004553|GO:0005975
Gma04g01456 534 SUPERFAMILY (Trans)glycosidases 26 345 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01456 Gma-Chr4 35938218 35942984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01456 6 455 Miscellaneous Gene Families AT2G19440 58.444 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01456 - - gmx:100781894 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01456 04 35938218 35942984 Gma06g01903 06 21256344 21258956 GST