Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01449 ATGGTTGCAACAGCCGCTACGGCGTCGTTTCTTCCCGTGCCTTTGCCAGACGCTGGAAAAGGGAAACCCAAGAAACTGGGTGGTGGTGGCGGTGGCGGTGGCGGTTCTGTGAACCTCGGAGGACTCAAACAGAAACAAGGTTTGTGCGGTGGCTTGCAGGTCAAGGCAAACGCACAAGCCCCTCCGAAGACCGTGGAGAAGGTTGAGAATGATTTGTCGTCGTCGTCCTCGTCGATTTCGCACGCCCCGAGGACTTTCATCAACCAGTTACCTGACTGGAGCATGCTTCTGGCCGCCATCACCACCGTGTTCCTGGCGGCGGAGAAGCAGTGGATGATGCTGGATTGGAAGCCGCGGCGCCCCGACATGCTCATTGACCCCTTTGGGATTGGGAAGATCGTGCAGGATGGGCTTGTGTTCAGGCAGAACTTCCCCATTAGGTCCTATGAGATTGGCGCCGATAAAACCGCGTCTATCGAGACTTTAATGAATCATTTGCAGGAGACTGCACTTAATCATGTTAAGACTGCTGGGCTTCTTGGTGATGGATTTGGTTCCACGCCTGAAATGTGCAAAAAGAACCTGATATGGGTGGTGACTAAGATGCAGGTTGTGGTTGATAAATATCCCACATGGGGTGATGTTGTTCAAGTAGACACTTGGGTATCTGCATCAGGGAAGAATGGTATGTGTCGTGATTGGCTTGTGCGTGACGCGAAATCTGGTGAAATCTTGACAAGAGCCTCCAGTGTTTGGGTCATGATGAATAAAGTGACAAGAAGACTGTCTAAAATTCCCGAAGAAGTCAGGGCAGAGATAAGCTCTTATTTTGTGGACTCTGCTCCAGTTGTGCCAGAGGATAACAGAAAACTAACCAAACTTGATGATTCCGCTAATTTCATTCGCACTGGTTTAAGTCCCAGATGGAATGATCTAGATGTGAATCAGCATGTTAACAATGTGAAGTATGTTGGGTGGATTCTGGAGAGTGCTCCACAGCCACTTTTGGAGAGCCATGAGCTGTGTGCCATGACATTGGAGTACAGGAGGGAGTGTGGCAGGAACAGTGTGCTGGATTCCCTCTCTGATCTCTCTGGTGCTGATGTAGGAAACTTGGCAGATGGTGGATTTTTTGAGTGCAAGCACTTGCTTCGACTTGATGATGGTGCTGAGATTGTGAGGGGTAGGACTCAATGGAGGCCCAAACCTTTAAGCAGCAACTTTGGTCATGTTTTGAGTCAGGTTCCAGTTCCAGCAGAAAGCACCTGA 1269 0.498 MVATAATASFLPVPLPDAGKGKPKKLGGGGGGGGGSVNLGGLKQKQGLCGGLQVKANAQAPPKTVEKVENDLSSSSSSISHAPRTFINQLPDWSMLLAAITTVFLAAEKQWMMLDWKPRRPDMLIDPFGIGKIVQDGLVFRQNFPIRSYEIGADKTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTKMQVVVDKYPTWGDVVQVDTWVSASGKNGMCRDWLVRDAKSGEILTRASSVWVMMNKVTRRLSKIPEEVRAEISSYFVDSAPVVPEDNRKLTKLDDSANFIRTGLSPRWNDLDVNQHVNNVKYVGWILESAPQPLLESHELCAMTLEYRRECGRNSVLDSLSDLSGADVGNLADGGFFECKHLLRLDDGAEIVRGRTQWRPKPLSSNFGHVLSQVPVPAEST 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01449 422 PANTHER PALMITOYL-ACYL CARRIER PROTEIN THIOESTERASE, CHLOROPLASTIC 1 405 - -
Gma04g01449 422 MobiDBLite consensus disorder prediction 13 32 - -
Gma04g01449 422 Pfam Acyl-ACP thioesterase 137 400 IPR002864 GO:0006633|GO:0016790
Gma04g01449 422 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 298 411 IPR029069 -
Gma04g01449 422 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 405 IPR045023 GO:0006633|GO:0016297
Gma04g01449 422 Pfam Acyl-ATP thioesterase 1 126 IPR021113 GO:0016790
Gma04g01449 422 Gene3D Hotdog Thioesterase 130 406 - -
Gma04g01449 422 CDD 4HBT 140 256 - -
Gma04g01449 422 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 134 286 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01449 Gma-Chr4 35682587 35687357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01449 29 409 Acyl Lipid Metabolism Gene Families AT1G08510 72.194 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01449 K10781 - gmx:100797796 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01449 04 35682587 35687357 Gma06g01907 06 21401369 21406350 GST