Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01374 ATGTCAGGTCTGAAGCATCTAATAGATAGAGCAAAGCAACATCACAATGTGAAGTATGTTAACATTACTTTATCATTCTTAATTGGTATTAAAGAGAATACTAAATTTCAAAAGAAATTACAGAACAATGAGCAGATGTCAGGTCTGAAGCATCTAGTAGATGGAGCAAAGCAGCATCACAATGTGAAGTATGCTGGTTATTGGGGTGGAGTGAAGCCAGCAACAATCAGCATGGAACATTATGACATTGCCTTGGCAGAGCCAGTGCAATCACCAGGAGTGCTAGGAAACCAACCAGACATTGTCATGGATAGCTTGGCTATACATGGCCTTGGCCTACTGCACCCAAAAAAGGTTTTCAATTTCTACTACGAGCTCCATGCTTACTTAGCTTCGTGTGGGACATGTGCCAAGCGGACTGCTATTGTGAGAGCTTTTGATGATTTTTACCCTCGTGATCCTACTTCCCACACCATCCATATTTCTTCGGTTGCATACAACTCATTATTCCTTGGAGAATTCATGCAACCTGACTGGGACATTTTACACCCAGCAGAAGATTATGATGTTGTAGCTCGTGCAATTGGTGGATGTCCTATTTATGTTAGTGACAAGCCAGGCAATGACAATTTTGATCTTCTAGTAAGTAATGTTGAGATAAGACTTAAGTGGTTTGCAGATGGAAACTGGAGGTTTCAGAATTCTAGTGCTGACCAGTTAGTATTGTATTTTCGATTAGGTGACGGTCATTCAGATTTTGATGCTTATGCTCCAAAGGATTTGCTTATTGTGACAACGGGATCTCAAGCAGAGCCACGTGCTGCCTTAAATCTTGCATATTCTAGAAGTAGTCATTCTTTCAAGTTGACAAAGGAAGATATTGTTTTGTATTCAGGTAAGGTTATCCCTGGTAACGAGTCTCGTGTTATGGAACTGCTAAACCGCATATCAGAGATTGGATCAACTATAGTTATGGGGAAGAATGAATGTCTGCACACGTCTGGTCATAGGTATCGTGGAGAGTTAGAAAATCCTGCAGCTGTTCTTGCTAATGAGATAAACACAAAGTTGTCTCGAAAATTAAATGTGGATGGGATGTTGACATTGAGAAAAGTGGTGGATGGACATGAGAAAGAAAATCAGAGAACCAAAATGCAAATAAGAGGTAACATCAATTTACATTTGAAGAATACATATAGAATTGTGGAGGTCTGGTTGGTTTGCGTTTTGTTTGTTTATGTGCAATTGAGCATTTTTATATAA 1263 0.3943 MSGLKHLIDRAKQHHNVKYVNITLSFLIGIKENTKFQKKLQNNEQMSGLKHLVDGAKQHHNVKYAGYWGGVKPATISMEHYDIALAEPVQSPGVLGNQPDIVMDSLAIHGLGLLHPKKVFNFYYELHAYLASCGTCAKRTAIVRAFDDFYPRDPTSHTIHISSVAYNSLFLGEFMQPDWDILHPAEDYDVVARAIGGCPIYVSDKPGNDNFDLLVSNVEIRLKWFADGNWRFQNSSADQLVLYFRLGDGHSDFDAYAPKDLLIVTTGSQAEPRAALNLAYSRSSHSFKLTKEDIVLYSGKVIPGNESRVMELLNRISEIGSTIVMGKNECLHTSGHRYRGELENPAAVLANEINTKLSRKLNVDGMLTLRKVVDGHEKENQRTKMQIRGNINLHLKNTYRIVEVWLVCVLFVYVQLSIFI 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01374 420 SUPERFAMILY (Trans)glycosidases 47 214 IPR017853 -
Gma04g01374 420 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 41 218 - -
Gma04g01374 420 PANTHER - 41 218 IPR008811 -
Gma04g01374 420 Pfam Raffinose synthase or seed imbibition protein Sip1 137 214 IPR008811 -
Gma04g01374 420 Pfam Raffinose synthase or seed imbibition protein Sip1 21 134 IPR008811 -
Gma04g01374 420 Gene3D - 223 333 IPR042173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01374 Gma-Chr4 27015773 27018637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01374 27 214 Glycoside Hydrolase AT3G57520 56.078 9.01e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01374 K06617 - gmx:102667161 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01374 04 27015773 27018637 Gma04g01374 04 27015773 27018637 ECH