Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01004 ATGATTCACAGTGTTCTAAAAGCAAGTAGGTTCCTCAATCCACGTAGACAAACCCTTGGTTTGACTATTTCCGTTAGTGGTTGTGTTTATCGTTTAGCATTTAGTTCAATGAAAGAAATCAATTGTAAAGTGGATTCTAGTTCATGTACTCTTGCCCCCAATAGGGAACCCTGCATTACAGATTCCTTATCAGTCAGCGGGAATTGCACTACTTCATCTACGAGTGTAAAATCCACCCCTGAAATTGAAAAGAAGTATGTTCATCATGTATATGATGCTATTGCGCCGCATTTCAGTGCCACCCGGTTCGCCAAGTGGCCGAAGGTTGCAGCATTTTTGTCATCTTTGCCTTTGGGATCTCTTGTCTTTGATGCGGGATGTGGGAATGGGAAATACTTAGGTTTGAATCAGGATTGTTTTTTCATAGGATGTGATATAAGTCCTTCCTTGATTAAGATCTGCTTGGATAGAGAGCATGAAGTTCTGGTTGCAGATGCTGTGAATCTCCCTTACAGGACTGGTTTCGGCGATGTGGCAATATCTATAGCTGTGTTACATCATTTAAGCACTGAAAATAGAAGGAGAAAGGCAATAGAAGAATTGGTCAGAGTTGTTAAAAAGGGTGGCCTTGTTCTGATTACAGTTTGGGCTGTAGAGCAAGAGGATAGTAAGCTGATTACCAAATGGACACCACTGAATGAGAAGTATGTTGATGAGTGGGTAGGACCAGGAAGTCCTCGTACTCGGGCGCCTTCATCCTCATCATTGGAAAGTATCCCCGAAAGTGAGGTGAGTCGCTCTGGTGAGCACATGGAAGTTTGCAATGAGCCACATGTATCAAGAGATTTGGAGGAAGAAAAAAATATAAAGAATCAACAGGAATACTTTGTTCCCTGGCATTTACCTTATCATCGTGCTGAAATCAGTGGTGCTTCTGCTGAAGCTCTTGCTGCTGGTCTGGCAACGAAAGATGACAAAAAAGGTGCTGTGGTGTATAATCGATATTATCATGTTTTTAGTGAAGGCGAGCTTGAAAGTTTGACAACTGGAATAAACAATGCCAGAATTGTTGATCAGTTTTTTGATAAATCCAACTGGTGTATTATTCTTGAGAAGACAGTGTGA 1125 0.4142 MIHSVLKASRFLNPRRQTLGLTISVSGCVYRLAFSSMKEINCKVDSSSCTLAPNREPCITDSLSVSGNCTTSSTSVKSTPEIEKKYVHHVYDAIAPHFSATRFAKWPKVAAFLSSLPLGSLVFDAGCGNGKYLGLNQDCFFIGCDISPSLIKICLDREHEVLVADAVNLPYRTGFGDVAISIAVLHHLSTENRRRKAIEELVRVVKKGGLVLITVWAVEQEDSKLITKWTPLNEKYVDEWVGPGSPRTRAPSSSSLESIPESEVSRSGEHMEVCNEPHVSRDLEEEKNIKNQQEYFVPWHLPYHRAEISGASAEALAAGLATKDDKKGAVVYNRYYHVFSEGELESLTTGINNARIVDQFFDKSNWCIILEKTV 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01004 374 Gene3D Vaccinia Virus protein VP39 98 373 IPR029063 -
Gma04g01004 374 MobiDBLite consensus disorder prediction 247 262 - -
Gma04g01004 374 PANTHER UNCHARACTERIZED 72 367 - -
Gma04g01004 374 Pfam Methyltransferase domain 124 213 IPR013216 GO:0008168
Gma04g01004 374 PANTHER BNAA05G09210D PROTEIN 72 367 - -
Gma04g01004 374 CDD AdoMet_MTases 122 218 - -
Gma04g01004 374 MobiDBLite consensus disorder prediction 241 282 - -
Gma04g01004 374 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Gma04g01004 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 68 236 IPR029063 -
Gma04g01004 374 MobiDBLite consensus disorder prediction 263 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01004 Gma-Chr4 11471413 11474341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01004 K10770 - gmx:100784028 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01004 04 11471413 11474341 Gma04g01004 04 11471413 11474341 ECH
Gma04g01004 04 11471413 11474341 Gma06g00955 06 8891798 8894159 GST