Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00956 ATGGAGGAGCGGGTGTTGTTGCCATCACCGCCACCGCCACCGCCACCTCTCGAAAAGAAACATAGTACCAACAAACTCGAGTTACCAGACTTCAACCCTGGCACCTACGTTGTCCAGGTCCCCAAGGACCAAGTCTACCGTGTTCCGCCGCCGGAAAACGCCCGAATCGCCGAGAGCCATAAGAAAGCCCCTCCCAAGGCGGCGAAAACGTCACGCTGCTGCTTGTTTTGCGTATTGTTCTTCATTATATTCTTCGTCCTTCTCATTCTTCTAGGAGCCGTTCTAGGTGGTCTTTTTTCCATGTTACTCACACCAAAGGACCCTCAGTTTTCCATCACACGCTTTAAGGTGGTGGAGACCAAACCCCACCCCAAATACGACGTCACTTTGGAAGTTCACAATCTAAATTCCGACGTGGGAGTTTCGTATAAAAACAAAGGCCATGTCTCCCTCTCTCTTAGGCGACAAGAGGTTGCTTCAGGAGCGTACCCTAGTTTCAATCAAGACGCTCACGATAGGACAACGTTTGGCGTAACTTTAACATCCTCAAAAGTCGGTCTCCCAAAGGAGGTGGAGGAAAGCGTCACGAACGATAAGAAGAAAGTGAATGTGACATTCTCTTTGGCCATTCACGCCCTAGCACGCATGAAAATGGGCTTGTTGCGTAGTGGGACAATGAAATTCGATGTTACGTGCAATGTGAAGTTGGATACATTGGCCAAAACCACTCAAGTACTCTCTCAACAATGCGAAACTAAACGACACTAG 768 0.4883 MEERVLLPSPPPPPPPLEKKHSTNKLELPDFNPGTYVVQVPKDQVYRVPPPENARIAESHKKAPPKAAKTSRCCLFCVLFFIIFFVLLILLGAVLGGLFSMLLTPKDPQFSITRFKVVETKPHPKYDVTLEVHNLNSDVGVSYKNKGHVSLSLRRQEVASGAYPSFNQDAHDRTTFGVTLTSSKVGLPKEVEESVTNDKKKVNVTFSLAIHALARMKMGLLRSGTMKFDVTCNVKLDTLAKTTQVLSQQCETKRH 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00956 255 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 21 253 - -
Gma04g00956 255 MobiDBLite consensus disorder prediction 1 19 - -
Gma04g00956 255 MobiDBLite consensus disorder prediction 1 25 - -
Gma04g00956 255 Pfam Late embryogenesis abundant protein 129 232 IPR004864 -
Gma04g00956 255 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 21 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00956 Gma-Chr4 9862061 9862828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00956 33 252 EF-hand Containing Proteins AT5G21130 30.837 9.37e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00956 - - gmx:100790243 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00956 04 9862061 9862828 Gma04g00956 04 9862061 9862828 ECH
Gma04g00956 04 9862061 9862828 Gma06g00935 06 8660383 8661391 GST