Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00953 ATGGCAGGGAAAACCAAGAACAAAGTGGAGGTTCAATTGGGTTGCGGTTTGGTGGGGAGAATTTTCCATCTCAAAACCAATAATAGGCCTAGAAAATCCTCTGTTCATTCACTACCCCTGAAGCCTTGCAACACTGCACAACAGAGGGATCAGGGCAAAAACGAATCCAAAGCCCCTCCAAACCATGAACCAAAAGATAGCTCCATTGAAACCATTCCTACACTGAAAGGGGAGCAGAATCCAGCAAGAAAGAGTAGACAACAACAGAAAGATCACCCTGTTGTTAACTCTCTGGAACTTGCCAGGATAAGTACTAGTACCAGTCATCATCAAAACTACGGGACGAAATCCCCGGCCAAAGAATTTGTGTTACCAATCACTGGGAATTTGCTTGTGAATAGCAGCCCAAGAACTAGTGTCACAAAGAGCAAAGAGTTGAACTCTTTGTCCGGTTCCTGTTCTTACAACAGTAATAGTACTAACAAAGGCATGATGGGGAACATCATGAGGAAGAACAGCGATGAGCTTGGGCAATTTCGGAGTCTGAGGAACAGCAGAGTGGACCCTGAGGTGTTGAAGTCCATGGGGAATGAAGCGTACAAGCAGGGAAGATTTGAAGAGGCTTTGGCTTTGTATGACAGAGCCATTGCTGTTGACTCCAAGAAAGCAACATATCATTGCAACAAGAGCGCGGCTTTGATAAGCTTGGGAAGGTTTCTGCAGGCAATTGTTGAGTGTGAGGAAGCTATCAGGTTGGAGCCTTCGTATGGCAGAGCCCACACCCGTTTAGCAACAATTTATTTCAGATTGGGAGAGGCTGAAAAGGCACTGAATTGCAATGAAACAAGCCCATGTGTTGATTCCGTACTTGCTTTCCAGGCTCAGGCTCTTCAAAATCACCTTAGCAAATGCACTGAAGCTCGGAAAGTCAAAGATTGGAAAGTTATATTAAAGGAATCACAGGCTGCAATATCCTTGGGTGCTGATTCAGCTCCACTGGTCTATTGTTTACATACTGAAGCCTTGCTGAAGCTCCTAAGACATCAAGAGGCACACGCTACCTACGAGAAAATGCCAAAATTTGACCTTGATTATTCTAACAAATTATTTGGCCCGGTTCGTAGTGCTTACCTATTGATGATAGGCACACACATTTACTTGGCAACCGGCAGGTTTGAGGATGCAGTGATAGCATCTCAGCAAGCATCTAAGTTAGATCCAAGTAGCTTTGAGGTGAATGCAGTGGTAAGGAGGGCCAGAGCAGTGGCATCAGCCAGAATGAGTGGTAACTTACTCTTCAAGGCATCAAAATTCACGGAAGCATATGCTGTATACAATGAAGGACTAGAGCATGATCCATTCAACTCAGTTCTGCTATGCAATAGAGCAGCATGTCGTTCTAAGCTAGGTCAATTCGAGAAAGCAATTGAAGATTGTAATGTGGCACTTATAGTTCAGCcaagttatagcaaggcaaggttgaggagggcagattgcaatgccaagTTGGAAAGATGGGAAGCTGCGATTCAAGATTATGAAATGCTGTTAAGAGAAAAGCCAGGAGATGAGGAGGTGGCCAGGGCCCTGTTTGAGACCCAGCTCCAACTCAAGACGTTGCGTGGTGAAGATATTAAGGACTTGAAATTTGGCTCAAATTTGTTTTTCATCTCAAGCAATGATCGGTTTAGACATTATGTAACATCACCTGGGATGTCTGTGGTGCTTTTCTGTAACAAGGCAACCCACAAACAAGTGTTATTGGTGTTGGAGCAAACCTGCAAGAGATTTCCATCAGTTAATTTTCTTAAGGTTGAGATTGAAGACCACCCTTACTTGGCAAAATCAGAAGGTGTGAACTGCATCCCAGCTTTTAAAATATACAAGAATGGATCAAGGGTTAAAGAAATTCCAGGCAGCAACCACGACTTGTTGGAAAAATTAGTTAAATTATATAGCAACTGA 1965 0.4249 MAGKTKNKVEVQLGCGLVGRIFHLKTNNRPRKSSVHSLPLKPCNTAQQRDQGKNESKAPPNHEPKDSSIETIPTLKGEQNPARKSRQQQKDHPVVNSLELARISTSTSHHQNYGTKSPAKEFVLPITGNLLVNSSPRTSVTKSKELNSLSGSCSYNSNSTNKGMMGNIMRKNSDELGQFRSLRNSRVDPEVLKSMGNEAYKQGRFEEALALYDRAIAVDSKKATYHCNKSAALISLGRFLQAIVECEEAIRLEPSYGRAHTRLATIYFRLGEAEKALNCNETSPCVDSVLAFQAQALQNHLSKCTEARKVKDWKVILKESQAAISLGADSAPLVYCLHTEALLKLLRHQEAHATYEKMPKFDLDYSNKLFGPVRSAYLLMIGTHIYLATGRFEDAVIASQQASKLDPSSFEVNAVVRRARAVASARMSGNLLFKASKFTEAYAVYNEGLEHDPFNSVLLCNRAACRSKLGQFEKAIEDCNVALIVQPSYSKARLRRADCNAKLERWEAAIQDYEMLLREKPGDEEVARALFETQLQLKTLRGEDIKDLKFGSNLFFISSNDRFRHYVTSPGMSVVLFCNKATHKQVLLVLEQTCKRFPSVNFLKVEIEDHPYLAKSEGVNCIPAFKIYKNGSRVKEIPGSNHDLLEKLVKLYSN 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00953 654 MobiDBLite consensus disorder prediction 31 54 - -
Gma04g00953 654 SUPERFAMILY Thioredoxin-like 538 650 IPR036249 -
Gma04g00953 654 Pfam Tetratricopeptide repeat 445 477 - -
Gma04g00953 654 SUPERFAMILY TPR-like 189 411 IPR011990 GO:0005515
Gma04g00953 654 Pfam TPR repeat 196 232 - -
Gma04g00953 654 Gene3D Tetratricopeptide repeat domain 187 541 IPR011990 GO:0005515
Gma04g00953 654 Coils Coil 496 516 - -
Gma04g00953 654 Gene3D Glutaredoxin 551 653 - -
Gma04g00953 654 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 652 - -
Gma04g00953 654 SMART tpr_5 422 455 IPR019734 GO:0005515
Gma04g00953 654 SMART tpr_5 456 489 IPR019734 GO:0005515
Gma04g00953 654 SMART tpr_5 189 222 IPR019734 GO:0005515
Gma04g00953 654 SMART tpr_5 490 523 IPR019734 GO:0005515
Gma04g00953 654 SMART tpr_5 223 256 IPR019734 GO:0005515
Gma04g00953 654 SMART tpr_5 375 409 IPR019734 GO:0005515
Gma04g00953 654 SUPERFAMILY TPR-like 427 538 IPR011990 GO:0005515
Gma04g00953 654 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 652 IPR044534 -
Gma04g00953 654 Pfam Tetratricopeptide repeat 377 408 IPR019734 GO:0005515
Gma04g00953 654 ProSiteProfiles TPR repeat profile. 189 222 IPR019734 GO:0005515
Gma04g00953 654 CDD TRX_family 563 650 - -
Gma04g00953 654 Pfam Thioredoxin 586 648 IPR013766 -
Gma04g00953 654 MobiDBLite consensus disorder prediction 28 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00953 Gma-Chr4 9771952 9775706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00953 K09527 - gmx:100787041 1281.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00953 04 9771952 9775706 Gma04g00953 04 9771952 9775706 ECH
Gma04g00953 04 9771952 9775706 Gma06g00932 06 8612510 8616574 GST
Gma14g01719 14 46639595 46643467 Gma04g00953 04 9771952 9775706 PCT
Gma04g00953 04 9771952 9775706 Gma14g01719 14 46639595 46643467 PCT