Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00933 ATGGCGACGCCGGAACCGCAACTGGAACCCACTTCTGACCACCGCGTCGACTCTCTTCCGCTCGTCGACCTCCGCCTCCTCTCTCAACCCGAACTCTACACCCTCTCCCTCTCCGGCGCCACTCACTGCCATCGCCGTAACAGCGACGACGACTCCGTGATTCCCAAAATCGACCGTTCCAATTTTAACGAATCCGCCGGCAGCCGCAAACAGACCTACTCCAAACTCCGCCTCAACAAGCGCAAACAAAATCCCGCGGTTCCCGCCTCCTCCTCCTTCCACATTCCGCTCCACATTTCGGAGCCCGAGGAGGAAGAAAACTCCCGAATTGTCGCTCTTCTGCAGCAACTCTTCGGCGTCGAGCCTCTCCGCAACGCCCCGCGCAACGATGCGGCGGAGCGCCGCCTCGTTCCCGTCCAGGTCGACTTCAAACAGCCGCCTCCGATGTTCGCGGCGTTCCAGAACGTTCCAATTGACGTAGTCGCAGACAGCAGTCAGAGGAAGCGGAAGCGCGGGCGGCCGCGGaaggacgagaattcggtgacggttttcgtcgaggaaccgaagaaggttaccaaggaggagaattctgtgacggttttcgttgaggaaccgaagaaggttaACGGTAACGGCGAGGTGAACGCGGCGGTGGCGACAACGACGACGACTGTTAACGAGACTGTTGGTTTGGATGAGGATCCGTTTGAGGTGGAGTTGAAGAGGAGGACACAAGGATTGGAGACGGAGCCACAAGTGGTGGAATTTTTGGAGACTTTGAATGGAGAATGGGCGAGTCAGAGGAAGAAGAGGAGGATTGTGCCGGCCAGTGAACTTGGTGACTTGTTGCCTGCGGGATGGAAGATCGTGATTATTACTATGAGGAGGGCAGGTCGTGCTTCCGCTGTTTGTCGCCGTTACGTAAGTCCTGATGGACACCAGTTTGAGTCGTGCAAAGAAGCTTCTGCATACTTGCTTTCTGTTTTTGGTGTTCAAGATAGAAGCCATTTAAAATCTAGTTATTCTGATGGTGCTCAGCAATTGTCCAGTAGTATGAACAGGGCATCTGAAAGTAGTGTTGGTCATGTCCCTACTGGAGACATGAAGACTGATGCCAGTGCAAGTTATTTGCCCTCAGCTGGTGCACCTATACACTCTAGTCATGAGAAACAGCCCCCCATATCATCATCAATTGGGAGTGAAAATTTCAATAGTGATCTGGCTTTGGGATGTAAATTAGGAGATGCTACTGGTGGAGCCTTTAGAGACTTTGACTTTCAAACTGAAGATAAAAAACTATCGAAGGCTGATAAGGATGATGGAAATTCAGTTCAGGAATGTTTTGTGGAGGATAGAGTTTGTAATGTACAGAGTGAGAAGTTGGTTGGTGCTGTCGAGTCTAGTGATGCTGCATGCAATCTTTATATTCCTTTGGTTTTCTCTACTCCTTTCTCCAATAATAATAGTGACAATGGTCAATTTTTAGATGAAATAAATGCTTCCAGATGCATGAAGGGTGGCATTAGTAATTTTGCTAGTCACGATATAGATACTGGATGCTGTGAAACTGTTTCTTGTGGAAATGAGCAAGCACATGTTGACAACAATGGACTTGGGCTTTCTGTGAAATTAGTGGAAGAGAACATTCAGAAACTAAGTTTTGAAAGCAGCATGCTGGCTCCAAATTCTGAGGGGAAAATACATGCTGGTAAAAATTTAGAGGATGGACATCTTATCAGTTCACTGGAAGATATGGAGATTAGAGATGGAAAGGCCATTATGAATGACAAACAACAAATTATTTGTAGCAGAGACCAGACTGAAATTAAAGATGTTTCTACTGATGTTAAACTGCATAGTAGTTCTGAGGGTTGTTCACTCGTCTCATCTCATCATGAACTTAATACATCTACAAGTAATATGGACAGGACACAGACTTCCGAGCTGAAGGACTCTGCTGAGGAAAATATTTTTGATAGTGATTTATTTAGCTCATCTATTGATGAAAGAACACGTGTTCACAGTGGCTACATTAGTAATGTTTCTTTTAGCTCTTGCACACAGGATGCATCCGAGTATGGTGGATTTGATTTTGCTTCTGATCTTAAATTAGATAAGGATGTTAGTGATAATCATATTCTTTCAAATGAGGAGGCTGTGACAAGGAGTTTACGGGAAAGGAGTTCCTTGAATGACCAAAATAGCATGATGGACAATCTGTTGCACAGAAGTTCTGAAAGTAACTTATTTGCTCTAACTGGTAATCAGCACTCTTGTGCGTTTCATGATAATGTAAATATCTCTGATGGAACCTTTGATGCACTCAAAGTTGTTGATGCTGGTTGCATGGAGCCTCAGTTGGGCATTGTTTCTTGCAGCAATATTGCTGTTGATGCATATACTACTGCTAGCATTATGCAGGGAAAACCACAAGGATGTGTATCTGTTCCTCTTGGTGGAAGTATATTAAACTTTGAGAAGCCAAGTGATGATGGTGTTAATAAAGCAAATAAATCCTGCTTACCAGAGACCGCTCAGAATGAAGTTGAAATGTTCCAAACTGACTCTATGGGTCTGCCCAAATTTCGTTCTGCTGAGTGTGCTGGTAACCACAAGGCTCTGGTTGTATATTCTCAATTTCCTATTGAAGATGATAAGCTAAAAAAAAGATAA 2673 0.4347 MATPEPQLEPTSDHRVDSLPLVDLRLLSQPELYTLSLSGATHCHRRNSDDDSVIPKIDRSNFNESAGSRKQTYSKLRLNKRKQNPAVPASSSFHIPLHISEPEEEENSRIVALLQQLFGVEPLRNAPRNDAAERRLVPVQVDFKQPPPMFAAFQNVPIDVVADSSQRKRKRGRPRKDENSVTVFVEEPKKVTKEENSVTVFVEEPKKVNGNGEVNAAVATTTTTVNETVGLDEDPFEVELKRRTQGLETEPQVVEFLETLNGEWASQRKKRRIVPASELGDLLPAGWKIVIITMRRAGRASAVCRRYVSPDGHQFESCKEASAYLLSVFGVQDRSHLKSSYSDGAQQLSSSMNRASESSVGHVPTGDMKTDASASYLPSAGAPIHSSHEKQPPISSSIGSENFNSDLALGCKLGDATGGAFRDFDFQTEDKKLSKADKDDGNSVQECFVEDRVCNVQSEKLVGAVESSDAACNLYIPLVFSTPFSNNNSDNGQFLDEINASRCMKGGISNFASHDIDTGCCETVSCGNEQAHVDNNGLGLSVKLVEENIQKLSFESSMLAPNSEGKIHAGKNLEDGHLISSLEDMEIRDGKAIMNDKQQIICSRDQTEIKDVSTDVKLHSSSEGCSLVSSHHELNTSTSNMDRTQTSELKDSAEENIFDSDLFSSSIDERTRVHSGYISNVSFSSCTQDASEYGGFDFASDLKLDKDVSDNHILSNEEAVTRSLRERSSLNDQNSMMDNLLHRSSESNLFALTGNQHSCAFHDNVNISDGTFDALKVVDAGCMEPQLGIVSCSNIAVDAYTTASIMQGKPQGCVSVPLGGSILNFEKPSDDGVNKANKSCLPETAQNEVEMFQTDSMGLPKFRSAECAGNHKALVVYSQFPIEDDKLKKR 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00933 890 MobiDBLite consensus disorder prediction 340 360 - -
Gma04g00933 890 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 1 798 - -
Gma04g00933 890 MobiDBLite consensus disorder prediction 43 57 - -
Gma04g00933 890 Pfam Methyl-CpG binding domain 282 325 IPR001739 GO:0003677
Gma04g00933 890 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 1 798 IPR037472 -
Gma04g00933 890 MobiDBLite consensus disorder prediction 340 399 - -
Gma04g00933 890 MobiDBLite consensus disorder prediction 43 71 - -
Gma04g00933 890 SUPERFAMILY DNA-binding domain 279 328 IPR016177 GO:0003677
Gma04g00933 890 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 273 346 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00933 Gma-Chr4 9456806 9464241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00933 - - gmx:100780637 1692.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00933 04 9456806 9464241 Gma04g00933 04 9456806 9464241 ECH
Gma04g00933 04 9456806 9464241 Gma06g00915 06 8449711 8457172 GST