Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00898 ATGGGGAGCTTGAAAGGAGACAGTGGACATGCCAATGGCGAAAATCTTACCGAAGCTCTTTTGCCAACACGAGATGCACAACAACAACATCAAACAGACGACGAGGAACAAAGATTTGGTGACAAGCTCTGGCTTGAAACCAGGAAGTTATGGCTCATTGTGGGGCCCTCTATATTCAGCCGCCTCGCGTCGTTCACCATGAATGTTGTCACCCAAGCCTTCGCCGGTCACTTGGGTGATGTCGAACTCGCTGCCATTTCTATCGCCAACAACGTTCTTGTTGGCTTCAATTTCGGCCTCCTTTTGGGGATGGCGAGCGCGTTGGAGACACTGTGCGGGCAAGCGTTTGGGGCGAAGAGATACCACTTGTTGGGGATATACATGCAGAGGTCATGGATTGTTCTGTTCATGTGCTGTTTCCTGCTGTTGCCGTTTTATGTTTTTGCAACGCCGCTTCTGAAATTCCTAGGACAGCCAGATGACGTGGCAGAGTGGAGCGGGGTGGTGGCAGTGTGGCTCATTCCCCTGCACTTCAGTTTCGCGTTTCAGTTTCCTATGCAGAGATTCCTACAGTGCCAGCTCAAGACAGCAGTTATTGCTTGGGTTTCTCTGCTGGGTTTGGTGGTTAATGTGGTCACAAGCTGGCTCTTCATTTATGTCTGGGATTTTGGACTTTATGGCGCAGCTATTTCTTTGGACATTTCTTGGTGGGTTTTGGTTTTTGGCATGTATGCTTACATTGCCTATGGTGGCTGCCCTTTGACTTGGAATGGTTTCTCCCTTGAAGCTTTTTCTGGACTCTGGGAATTCCTCACACTCTCTTCCGCTTCTGGGGTCATGTTATGCTTAGAGAACTGGTACTACAAGATATTGCTACTTATGACTGGCCAGTTGGAGAATGCCACTATCGCTGTCGATGCCTTGTCTGTATGTATGACCATCAACGGGTGGGAAATGATGATTCCCCTGGCTTTCTTCGCGGGTACTGGGGTAAGGGTGGCGAACGAGTTAGGCGCAGGAAATGGCAAAGCAGCAAAATTTGCAACGCAAGTATCAGTGGCACAATCAACAATCATTGGGCTTATATTTTGCGTTCTGATAATGATATTCCATGAGCATATAGCATACATATTCACCACCAGCACTTCCGTCCTACAAGCCGTTGACAACATGTCATTACTCTTAGCTATCACCATTCTTCTCAACAGTGTACAACCCGTTTTGTCAGGAGTGGCTGTTGGATCCGGATGGCAAGCATACGTTGCATATATAAATATAGGATGCTACTACCTTATCGGGTTCCCACTCGGAATTATAATGGGATGGGTCTTCAAAAGTGGTGTAATTGGCATTTGGGGGGGCATGATTTTTGGTGGCACAGCAATTCAAACGCTGATACTGATCATAGTAACGATACGATGTGATTGGGAAAAGGAGGAGGAGAAAGCTTGCTTTCGTGTAAGTAAGTGGTCAAAATCTAACTCCAATGGCAATCTGGAAGCCTCCAATTAA 1512 0.4716 MGSLKGDSGHANGENLTEALLPTRDAQQQHQTDDEEQRFGDKLWLETRKLWLIVGPSIFSRLASFTMNVVTQAFAGHLGDVELAAISIANNVLVGFNFGLLLGMASALETLCGQAFGAKRYHLLGIYMQRSWIVLFMCCFLLLPFYVFATPLLKFLGQPDDVAEWSGVVAVWLIPLHFSFAFQFPMQRFLQCQLKTAVIAWVSLLGLVVNVVTSWLFIYVWDFGLYGAAISLDISWWVLVFGMYAYIAYGGCPLTWNGFSLEAFSGLWEFLTLSSASGVMLCLENWYYKILLLMTGQLENATIAVDALSVCMTINGWEMMIPLAFFAGTGVRVANELGAGNGKAAKFATQVSVAQSTIIGLIFCVLIMIFHEHIAYIFTTSTSVLQAVDNMSLLLAITILLNSVQPVLSGVAVGSGWQAYVAYINIGCYYLIGFPLGIIMGWVFKSGVIGIWGGMIFGGTAIQTLILIIVTIRCDWEKEEEKACFRVSKWSKSNSNGNLEASN 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00898 503 PANTHER PROTEIN DETOXIFICATION 29 484 - -
Gma04g00898 503 TIGRFAM matE: MATE efflux family protein 56 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma04g00898 503 CDD MATE_eukaryotic 46 482 IPR045069 GO:0042910|GO:1990961
Gma04g00898 503 Pfam MatE 278 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma04g00898 503 Pfam MatE 56 216 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma04g00898 503 PANTHER MULTIDRUG RESISTANCE PROTEIN 29 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00898 Gma-Chr4 8996775 9004319 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00898 K03327 - gmx:100500204 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00898 04 8996775 9004319 Gma04g00898 04 8996775 9004319 ECH