Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00895 ATGGCCGAAGGAAGAAACGAAGACAAAGACAGAACCATGAAGCGCCTTCTTCTCATAACAAACTGTCTCTTACTCACCATCGGCACCTCCGGTGGGCCCCTCGTGATGCGTCTCTACTTCCTTCACGGCGGCCACCGCGTCTGGCTCTCCAGCTTCCTCGAAACCGCCGGCTTCCCCCTCATGCTCCTACCCCTCGCCGTATCGTACTTCCGTCGCCGCCGCACCGCCGCCGCCGGAACCTCCAAACCGAAATTAATCTCTATGAAGCCCCCTCTCCTCGCCGCCTCCGCCTTCATCGGAATCCTCACCGGCCTCGACGACTACCTTTACGCCTACGGCGTGGCGAGGCTTCCGGTCTCCACTTCCGCCCTCATCATCGCAACGCAACTCGGCTTCACCGCGTTCTTCGCGTTCCTTCTCGTGAGGCAGAAGTTCACGGCGTACTCCGTAAACGCCGTCGTTTTGCTCACTGTCGGCGCCGGCGTTTTGGCGCTTCACACCAGCGGAGACCGTCCCCCTGGCGAGTCCGTTAAGGAATATGTTATGGGCTTTGTGATGACAGTGATCGCTGCGGCATTGTATGGATTCATTTTACCCTTGGTGGAGTTGGTGTACAAAAAAATCAAACAGCCTCTTACTTACTCTCTTGTCATGGAGATTCAGTTCGTTATGTGCTTCTCCGCCACTCTCTTTTGCCTCCTTGGAATGATCATCAACAATGACTTTAAGGTGATTCCGAGGGAAGCCAAAAAATTTGAGCACGGAGAAGGAAGTTACTATGCTGTTTTGGTGGGGAGTGCAATATTATGGCAGGCTTTTTTCTTGGGGGCGATTGGGGTTATATTTTGTGCCTCGTCTTTGTTTTCTGGTATTTTGATTGCGGTGTTGCTACCCGTAACGGAAGTGTTGGCGGTTATTTTCTACAAAGAAAAGTTTCAAGCCGAAAAAGGGGTTTCTCTGTTGCTCTCGCTTTGGGGCATGGTGTCCTACTTCTATGGGGAGATTAAACACTCAAAGAAAATGAAGATGAAGAACAGTGATACTGAAGCAGAACTGGCACAACAGTATTCGTGA 1074 0.5177 MAEGRNEDKDRTMKRLLLITNCLLLTIGTSGGPLVMRLYFLHGGHRVWLSSFLETAGFPLMLLPLAVSYFRRRRTAAAGTSKPKLISMKPPLLAASAFIGILTGLDDYLYAYGVARLPVSTSALIIATQLGFTAFFAFLLVRQKFTAYSVNAVVLLTVGAGVLALHTSGDRPPGESVKEYVMGFVMTVIAAALYGFILPLVELVYKKIKQPLTYSLVMEIQFVMCFSATLFCLLGMIINNDFKVIPREAKKFEHGEGSYYAVLVGSAILWQAFFLGAIGVIFCASSLFSGILIAVLLPVTEVLAVIFYKEKFQAEKGVSLLLSLWGMVSYFYGEIKHSKKMKMKNSDTEAELAQQYS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00895 357 PANTHER OS09G0467300 PROTEIN-RELATED 7 351 IPR030182 GO:0015211|GO:0016021
Gma04g00895 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 88 167 - -
Gma04g00895 357 Pfam Purine nucleobase transmembrane transport 17 340 - -
Gma04g00895 357 PANTHER PURINE PERMEASE 2 7 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00895 Gma-Chr4 8963378 8965114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00895 13 352 Organic Solute Cotransporters AT1G28230 64.265 3.24e-145 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00895 - - gmx:100803818 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00895 04 8963378 8965114 Gma04g00895 04 8963378 8965114 ECH
Gma04g00895 04 8963378 8965114 Gma06g00883 06 8166584 8168173 GST
Gma02g02002 02 45481877 45483887 Gma04g00895 04 8963378 8965114 PCT
Gma04g00895 04 8963378 8965114 Gma14g00235 14 2000970 2002398 PCT
Gma04g00895 04 8963378 8965114 Gma02g02706 02 52788212 52789302 PCT