Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00872 ATGTGTTTGATTGTTACACACAAAATGTTGGGAAGGGCAGCAACCAATGCATATTCATGGTGGTGGGCAAGCCACATCAGGACAAAGCAATCCAAATGGCTAGAACAAAGTCTCCGAGATATGGAAGATGTGATGGCTGAAACCCTCAACATCATTCATAATGAAGGAGAGTCATTTTCCCAAAGGGCAGAAATGTACTACAGGAAGAGGCCACAGCTGGTAGGTTATGTGGAAGAAGTCTTTCGCTCATATAGAGCATTAGCAGAGAGATATGATCTTCTATCAAAGGAGCTCCAAAGCGCCAACCACACTATTGCCATTGTTTTCCCAGAACAAGTCCATTATAGAATTGATGAGGATGATGCTGAAGAAAGTTTCCCTGGAACAAATTCATCATCTCAAGATCCCAACAATCAAACACCAAAACCAGGCATTCCTAAAGCTCCAAATTTCCCAAATAAGGACTTTAGAAGTCCATCAATGTTGCTTTCTAGGAAGGGTCCACTTAGGAGGGTTTCTAGCCCTGCAAAATCCCCTCCCACAAGTCCTAGTTCAGGTCTGAGTAAGGCTGAAGCACTAGCAGAAGTTGACAAGCTTCAGAAAGAAATTTTGGCACTACAGACTGAGAAAGAGTTTGTAAGGAGCTTGTATGAAAATTCCTATGAAAAGCACTGGGAAATTGAAGACCAGATTACACAAATGCAGAAAAGGGTTTGCAGCTTGCAAGATGAGTTTGGAATTAATACATTCATAGAAGATAACGATGCACGAGCTCTGATGGCTGCAACAGCTCTGAAGTCATGCAAAGAGACCCTGGCTAAGTTGCAAGAGGCACAGGCACAATCATCTGAAGAGGCTAAAGAATCATACCAAATGGTTAAGGAAGCTCACAGCAAGTTTGAAACCCTTAGAGACCTATTCATTTCTAAACATAAGAGTCAACAAGACCAAGTAACAGAACCAAAAAGCATTGAGGAAGAAGACATGTCTAGCTTGGAAGAAGAAATCTATGAACATGATGTGGGGCGGTTGCAAGACACAATTAAGGAAAAGCTTGAGGGAGATTCAGTTAGCTCCCTCACTATGACAGAAATGGCAGAGAAGATTGATGAGCTTGTAAATAAGGTCGTTACCCTTGAAACCACAGTCTCTTCTCAGACTGGCTTGGTAAAGAGACTGAGATCAGAAGCAGATGAACTTCAAAAAAAATTATTGAGCTTGGAAGAGGACAAAGAAGTGTTGATAGAAGATTCAGAAGGAACCAAAAAGAAGCTGGAAGAAGTGGAGGAGGAGTTGAAGAGAGTTAAAACTCTCAATCAAAGTGTCAAAAGGCAAGACAACAGCCTCCAGACACAGTTTACTGAAGCTAGTTGTGATCTTAAACATCTTTCAGGAAAATTGAATGATGTGAAGCTAGATGAGGAGGGGGAGAACTTGCAACTTCACAAAAACAAAAGTGCACATGATGGAGAACTGAAAGAGGAGTCTGAAAAACCAGGTGACAACACAGAAACCATGAAGGATATTGAGACAACAAAGGAAGAAAAGGAAGATTGTAGTGTAAATCTTAGTGATGTTGAAAATGAAGATAACAAGTCCAATTCGAAAGAAAATGTTGATTTTAGGACTGAAGAGATTCCAGAGCAAATGCTGCAGAATAAGGATGATTTGTCTGAGGCAAGGAGTAATCTTGACACTGAATCACTTGATCAGGAGACTGGTGAGGAAGAAAATCAATCCAACAGGAGTCAGATGATTGCAAGTGGATTTGATGACAGAGAAAAGATTCTGAAGGAATTCACATCAGTTTTAAAGAACTACGAGGATGTAAAGGACGAGCTCAATGATGTGGTGAAGAAAAACCAGGACAGCATTTTTCAATTGGCACTTCAGAAGTTGTATACTAGGCACTACATTACCTCCAGTCCTCAGAATGTAGATCTACACTTGCAGGTGAGGGAATTGAAGGATACTGTTGAAACTAAAGATCAAGAGATAAACATTTTACAACAGAAGCTGACCTGTTCGGAAACAAATCCAGATGAAAGTCCTTGCACCCCTGTTACAGATTATAAATACACACCACAAGAAGCACTTCTTGGAACTGCAGCTCAAGGAACCGACCCTCAGGACCCTGAAAATCCATCTTCAAATACAGATGCAATTGCAGTTAGTACTTCTTATGCAGGGAAACACCAACAATATGTTGAAAACAAAGGAAGGATTGGCATATTAGTGAAGGTGAGACCAAACCAGCTTGATAAGAGCCACTCACTTTCAACCTTGGAAAAGAAATTTCGTTCCAACATTGATGATTTGCTTGAGGAGAACTTGGAGTTCTGGTTGAGGTTTAGCACCTCAGTGCACCAGGTTCAAAAGTTTCAAAGTTCTATAGAGGACTTAAAATTTGAGCTTAAAAGAATAAGGGATAACATGTTTCAAGAGAACTCAAGTTCTATACAATCTGAGATAAAACCAATATTTAGACACCTAAGGGAGATAAGAACTGATTTATCACTATGGCTGGAACACAGTGAAGTGTTGCATGAAGAGTTGCAAGGTAGGCATCCATCATTGTGCACCTTACAAGATGAAATAGCAAGAACAGCCAATCCAAACCCTGCATCAAATAACATGGCAAAACTAAGTGGGTATCAGGCTGCAAAGTTTCAAGGTGAGGTTCTCAACATGAAACAGGAGAGCAACAAGGTTTCTAGTGAACTGCAAGGATGTGTCAGTTTTGTGAAGGAACTGAAGGGCCAAGTTGAGAAGATGCTAGAAGAACTGAGTCAAGAAATTGGAGTTAACAATCATGACCATATGAAACACTCCACAAGTAGTTCTAGAATACCCTTGAAGTCTTTTCTGTTTGGAATCAAGTTAAAGAAGCAAAAGCAATCGTTCCTCTCATGTGTAACTCCAACAAAGAGACAACACAGGAATCTAGCAGCGGCTGAAGATGCCCCTATATAG 2973 0.405 MCLIVTHKMLGRAATNAYSWWWASHIRTKQSKWLEQSLRDMEDVMAETLNIIHNEGESFSQRAEMYYRKRPQLVGYVEEVFRSYRALAERYDLLSKELQSANHTIAIVFPEQVHYRIDEDDAEESFPGTNSSSQDPNNQTPKPGIPKAPNFPNKDFRSPSMLLSRKGPLRRVSSPAKSPPTSPSSGLSKAEALAEVDKLQKEILALQTEKEFVRSLYENSYEKHWEIEDQITQMQKRVCSLQDEFGINTFIEDNDARALMAATALKSCKETLAKLQEAQAQSSEEAKESYQMVKEAHSKFETLRDLFISKHKSQQDQVTEPKSIEEEDMSSLEEEIYEHDVGRLQDTIKEKLEGDSVSSLTMTEMAEKIDELVNKVVTLETTVSSQTGLVKRLRSEADELQKKLLSLEEDKEVLIEDSEGTKKKLEEVEEELKRVKTLNQSVKRQDNSLQTQFTEASCDLKHLSGKLNDVKLDEEGENLQLHKNKSAHDGELKEESEKPGDNTETMKDIETTKEEKEDCSVNLSDVENEDNKSNSKENVDFRTEEIPEQMLQNKDDLSEARSNLDTESLDQETGEEENQSNRSQMIASGFDDREKILKEFTSVLKNYEDVKDELNDVVKKNQDSIFQLALQKLYTRHYITSSPQNVDLHLQVRELKDTVETKDQEINILQQKLTCSETNPDESPCTPVTDYKYTPQEALLGTAAQGTDPQDPENPSSNTDAIAVSTSYAGKHQQYVENKGRIGILVKVRPNQLDKSHSLSTLEKKFRSNIDDLLEENLEFWLRFSTSVHQVQKFQSSIEDLKFELKRIRDNMFQENSSSIQSEIKPIFRHLREIRTDLSLWLEHSEVLHEELQGRHPSLCTLQDEIARTANPNPASNNMAKLSGYQAAKFQGEVLNMKQESNKVSSELQGCVSFVKELKGQVEKMLEELSQEIGVNNHDHMKHSTSSSRIPLKSFLFGIKLKKQKQSFLSCVTPTKRQHRNLAAAEDAPI 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00872 990 MobiDBLite consensus disorder prediction 121 189 - -
Gma04g00872 990 PANTHER PROTEIN NETWORKED 2D 9 978 - -
Gma04g00872 990 MobiDBLite consensus disorder prediction 126 141 - -
Gma04g00872 990 PANTHER PROTEIN NETWORKED 2A 9 978 - -
Gma04g00872 990 Coils Coil 189 216 - -
Gma04g00872 990 Pfam KIP1-like protein 19 92 IPR011684 GO:0003779
Gma04g00872 990 Coils Coil 84 104 - -
Gma04g00872 990 Coils Coil 652 672 - -
Gma04g00872 990 Coils Coil 509 529 - -
Gma04g00872 990 Coils Coil 265 288 - -
Gma04g00872 990 Coils Coil 791 811 - -
Gma04g00872 990 Coils Coil 597 624 - -
Gma04g00872 990 Coils Coil 362 445 - -
Gma04g00872 990 MobiDBLite consensus disorder prediction 474 568 - -
Gma04g00872 990 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 18 98 IPR011684 GO:0003779
Gma04g00872 990 MobiDBLite consensus disorder prediction 474 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00872 Gma-Chr4 8606423 8610476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00872 - - gmx:100805236 1752.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00872 04 8606423 8610476 Gma06g00861 06 7912540 7916587 GST
Gma14g01814 14 48561271 48565811 Gma04g00872 04 8606423 8610476 PCT
Gma02g02035 02 45931423 45935364 Gma04g00872 04 8606423 8610476 PCT