Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00851 ATGGACTCCGTTCCGTTTCGCGATGGCAGCATACACACCATTCTCGACTCCCGATATTTTCACTCTCCGCTGGATGTTAGTCATAGTTTGCACACTCATTCCTCGTTGATTCGGAGGCTTTCTCAAGAAACGGAGTTAGAGGGTCACACTGGCTGTGTCAATGCGGTGGCTTGGAATTCCAAAGGTTCGATACTGATATCCGGATCAGATGATTTACGGATCAATATTTGGAGCTATTCTGGCTGGAAACTTTTACATTCAATTGACACAGGACATACTGCAAATATATTCTGTACTAAGTTTATACCAGAAACTTCTGATGAGCTTGTAGCCTCTGGAGCTGGAGATGCTGGAGTCCGGTTATTTAATTTGTCTCGCTTAAGTGGGAGTGGATTTAGTGACAATGCCATCATTGCTCCATCTGCACATTACCAATGTCACACTCGAAGAGTCAAGAAATTGGCTGTTGAAAATGGAAACCCCAATGTAGTATGGAGTGCTAGTGAAGATGGGACCCTAAGGCAACATGATTTTCGGGAAGGTACCTCTTGTCCTCCAGCTGGATCTTCGCACCAAGAGTGTCGAAATATTCTTCTTGACTTACGAAGTGGATCTAAAAGGTCACTTGCTGATCCTCCTAAACAAGTCCTTGCTTTAAAATCTTGTGATATTAGTTCAACTAGACCACATTTGCTTCTTGTTGGTGGGAGTGATGCCTTCGCACGCTTATATGATAGAAGGATGCTGCCGCCTCTTAGCTCATGTTGGAAAAGAATGTCTCCACCTCCTTGTGTTAATTATTTCTGTCCAATGCATCTTTCTGATCATGGACATCCAAGCTTGCACTTAACTCATGTTACATTCAGTCCTGATGGACACGAGGTTCTCCTCAGCTATAGTGGAGAGCACGTTTACTTGATGAATGTAAATCATGCTGGAGTGAATGAGATGCAATATACTTCAGGAGATGATTCAAAGCTGATGACATACTCTCCAACAATTAATGGGACAGAGATGCAGCCTTGTGTATCTAATGTCTTCCCAAATGGATTTCCTATTAAAAAGAACATCGCTGCAAAGCTTGACAAGTGCAGGAAACTAATAAAATATGCTAAGAAATCATTGGACAATGGGACACCCTATTATGGAATTGATGCATGTAATGAGGTTTTGAATGGCTATAGCCATATTATTGGGCCTGCACTGAAACATGAATGCTTGTGTACTCGTGCTGCACTATTGGTCAAGAGGAAGTGGAAAAACGATGCTCATATGGCTATAAGAGACTGCTATGCTGCAAGGGAAATTGATAATTCCTCTTACAAAGCACTATACTATATGTCAGAAGCATTGTCACAGTTGGGTAGACATGAAGATGCTTTGGAGTTTGCTGTTGCTTCCCATTCATTGGCCCCATCCAAATCTGAAGTTGCAGAAAGAGTAGCGAATGTGAAGAGGGACATTGCTTTGGCTGAAGCTGAAAAAAGTAGTAAGACCAATGATGGGGCATCAAGGTTTGATAGTAGGGGTGGACGAATATTATCATTAAGTGACATACTCTATCGTCCTGGGTCTAATGGTGATCCTCCACAAGATGGTTCAAGATTAGAGAGGGATGATTCTGATTATAACGAGGAATTGGAGTTGGACTTTGAAACATCGATATCTGGTGATGAGGAACATGATCTTGAATCAAATATTCTTCATGGAAGTTTAAATCTTAGAATTCATCGGAGAGGTGACTCCAGAGACAATGCTCGTGCAAGTGGCTCATGCGAATCACCTTCATCCTCGTCACAGAACAGTAGAACTTCTTATCAGCCTGAACCAGCTGTTGATATGAAACAGAGATTTGTTGGCCACTGCAATATTGGGACTGACATAAAACAAGCCAGTTTTCTTGGTCAAAGAGGTGAATATGTTGCTAGTGGAAGTGATGATGGCAGATGGTATATTTGGGAAAAGCGTACGGGCAGACTCATAAAAATGCTGAATGGTGATGAATCTGTTGTAAATTGTGTTCAATGCCATCCATTTGATTTTGTTGTTGCAACCAGTGGGATTGATAGCACAATAAAGATATGGACTCCAAATGCTCCTGTTCCATCTTCTGTAGCTGGTGGTTCAGCAGGACCAGAAACTGGCGATGTGTTGGTTGCTATGGAGAGCAATCAACAAAAACTATCTCGTAGCCATAATTCTATCTTGCCATTTTTGGAACCGTTTGCTAATTTTCATCCGGTGGGTGCTCTATTCGGTTGTGTGCATATGAATCTGGATTGA 2283 0.4196 MDSVPFRDGSIHTILDSRYFHSPLDVSHSLHTHSSLIRRLSQETELEGHTGCVNAVAWNSKGSILISGSDDLRINIWSYSGWKLLHSIDTGHTANIFCTKFIPETSDELVASGAGDAGVRLFNLSRLSGSGFSDNAIIAPSAHYQCHTRRVKKLAVENGNPNVVWSASEDGTLRQHDFREGTSCPPAGSSHQECRNILLDLRSGSKRSLADPPKQVLALKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSCWKRMSPPPCVNYFCPMHLSDHGHPSLHLTHVTFSPDGHEVLLSYSGEHVYLMNVNHAGVNEMQYTSGDDSKLMTYSPTINGTEMQPCVSNVFPNGFPIKKNIAAKLDKCRKLIKYAKKSLDNGTPYYGIDACNEVLNGYSHIIGPALKHECLCTRAALLVKRKWKNDAHMAIRDCYAAREIDNSSYKALYYMSEALSQLGRHEDALEFAVASHSLAPSKSEVAERVANVKRDIALAEAEKSSKTNDGASRFDSRGGRILSLSDILYRPGSNGDPPQDGSRLERDDSDYNEELELDFETSISGDEEHDLESNILHGSLNLRIHRRGDSRDNARASGSCESPSSSSQNSRTSYQPEPAVDMKQRFVGHCNIGTDIKQASFLGQRGEYVASGSDDGRWYIWEKRTGRLIKMLNGDESVVNCVQCHPFDFVVATSGIDSTIKIWTPNAPVPSSVAGGSAGPETGDVLVAMESNQQKLSRSHNSILPFLEPFANFHPVGALFGCVHMNLD 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00851 760 SUPERFAMILY WD40 repeat-like 39 695 IPR036322 GO:0005515
Gma04g00851 760 ProSiteProfiles Trp-Asp (WD) repeats profile. 664 695 IPR001680 GO:0005515
Gma04g00851 760 MobiDBLite consensus disorder prediction 587 608 - -
Gma04g00851 760 Pfam WD domain, G-beta repeat 44 78 IPR001680 GO:0005515
Gma04g00851 760 Pfam WD domain, G-beta repeat 660 695 IPR001680 GO:0005515
Gma04g00851 760 MobiDBLite consensus disorder prediction 578 608 - -
Gma04g00851 760 ProSiteProfiles Trp-Asp (WD) repeats profile. 46 87 IPR001680 GO:0005515
Gma04g00851 760 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 26 735 IPR045151 -
Gma04g00851 760 PANTHER WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1 26 735 - -
Gma04g00851 760 Coils Coil 474 494 - -
Gma04g00851 760 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 46 78 - -
Gma04g00851 760 SMART WD40_4 657 696 IPR001680 GO:0005515
Gma04g00851 760 SMART WD40_4 81 123 IPR001680 GO:0005515
Gma04g00851 760 SMART WD40_4 39 78 IPR001680 GO:0005515
Gma04g00851 760 SMART WD40_4 611 654 IPR001680 GO:0005515
Gma04g00851 760 SMART WD40_4 212 245 IPR001680 GO:0005515
Gma04g00851 760 SMART WD40_4 266 308 IPR001680 GO:0005515
Gma04g00851 760 SMART WD40_4 137 177 IPR001680 GO:0005515
Gma04g00851 760 Gene3D - 569 700 IPR015943 GO:0005515
Gma04g00851 760 MobiDBLite consensus disorder prediction 518 538 - -
Gma04g00851 760 Gene3D - 25 130 IPR015943 GO:0005515
Gma04g00851 760 Gene3D Tetratricopeptide repeat domain 354 488 IPR011990 GO:0005515
Gma04g00851 760 SUPERFAMILY TPR-like 403 485 IPR011990 GO:0005515
Gma04g00851 760 Gene3D - 131 336 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00851 Gma-Chr4 8353232 8373932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00851 K11807 - gmx:100793917 1494.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00851 04 8353232 8373932 Gma04g00851 04 8353232 8373932 ECH
Gma04g00851 04 8353232 8373932 Gma06g00839 06 7734059 7749606 GST