Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma04g00843 | ATGGCATCACTCTCAGGCATTTGCTCCTCTTCCCCGACTCTCAAAAAATTCCCAAACCAATCCCCATCGTTGACCGACCCTCTCCGCAAAGACCACGTGTCCTTCCCCGCACGCCTCGCCGATCGGACCCTCAGCCTCGCGCCGCTCCGTGCGGTGGCTCGGGAGGTTTCCGACGGAGCGTTGGCGGCGGCGGTGAAGAAGGGGTTGGAGAAGGATCCGCGCGCGCTGTGGCGGAGATACGTGGGTTGGCTGTACCAGCACAAGGAACTTGGGATTTACTTGGATGTGAGTCGGGTCGGGTTCAGTGATGAGTTCGTTAAGGAGATGGAACCCCGTTTCCAAGCGGCGTTTCGGGCGATGGAGGAGTTGGAGAAGGGCGCGATCGCGAATCCCGATGAGAGTCGCATGGTGGGACACTATTGGCTGAGGGACCCTAAGCGTGCGCCCAACTCGTTCCTTAAAACGCAGATTGAGAACACTCTCGACGCTGTTTGCAAGTTCGCTAACGACGTCGTTAGTGGTAAGATTAAGCCTCCTTCGTCTCCGGAGGGTCGATTTACTCAAATATTGTCTGTGGGAATTGGAGGTTCTGCTCTTGGACCACAGTTTGTTGCAGAAGCATTGGCACCTGATAATCCTCCACTCAAGATAAGATTTGTGGACAACACGGATCCTGCTGGAATTGATCATCAGATTGCACAACTTGGGCCTGAGCTAGCTTCAACACTTGTGATTGTGATATCAAAGAGTGGAGGTACTCCTGAGACCAGAAATGGTTTATTGGAAGTGCAGAAGGCCTTTCGTGAAGCAGGCTTGGATTTTCCTAAACAGGGTGTTGCTATAACACAAGAAAATTCTTTGTTGGATAACACTGCCAGAATTGAGGGCTGGTTAGCTAGATTTCCTATGTTTGATTGGGTGGGAGGTAGAACGTCAGAGATGTCTGCAGTTGGCCTGCTTCCAGCAGCCCTTCAGGGCATTGATATTAGAGAAATGCTTGCCGGTGCATCATTGATGGATGAGGCTAATAGGAGTACTGTGTTAAGGAATAACCCTGCAGCTCTGCTGGCTTTATGTTGGTATTGGGCTACAGATGGTGTAGGATCCAAGGATATGGTTATTCTTCCATACAAGGACAGCCTGTTATTATTCAGTAGATACTTGCAGCAGCTGGTCATGGAATCTCTAGGCAAGGAGTTTGACTTGGATGGTAATCGGGTTAATCAAGGAATTAGTGTCTATGGAAACAAAGGAAGCACAGATCAACATGCCTATATTCAACAATTAAGGGAAGGTGTACACAATTTCTTTGTAACATTCATTGAGGTGCTACGTGATAGACCTCCTGGTCATGATTGGGAACTTGAACCTGGTGTCACATGCGGTGACTACTTGTTTGGTATGCTACAGGGAACAAGATCAGCTCTGTATGCCAATAACCGAGAGTCCATCACAGTTACTGTACAAGAAGTGACACCTAGAACAGTTGGTGCTCTTATTGCACTCTATGAACGAGCAGTAGGAATTTATGCCTCCCTTGTCAACATAAATGCTTATCATCAACCAGGTGTGGAAGCTGGTAAAAAAGCAGCAGGTGAAGTACTAGCACTTCAGAAGCGAGTGTTGGCAGTGCTAAATGAGGCAAGCTGCAAAGAACCTGTAGAACCATTGACCCTCGAAGAAGTAGCAGACCGTTGCCATGCTCCTGAAGATATCGAAATGATTTACAAGATTATCGCACACATGGCTGCCAATGACAGAGCATTGATTGTCGAAGGCAGCTGTGGTTCACCACGCAGCATCAAGGTTTTTCTTGGGGAATGTAACATTGATGGGTTGTATGCATGA | 1848 | 0.4843 | MASLSGICSSSPTLKKFPNQSPSLTDPLRKDHVSFPARLADRTLSLAPLRAVAREVSDGALAAAVKKGLEKDPRALWRRYVGWLYQHKELGIYLDVSRVGFSDEFVKEMEPRFQAAFRAMEELEKGAIANPDESRMVGHYWLRDPKRAPNSFLKTQIENTLDAVCKFANDVVSGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFVDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQGIDIREMLAGASLMDEANRSTVLRNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFVTFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESITVTVQEVTPRTVGALIALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTLEEVADRCHAPEDIEMIYKIIAHMAANDRALIVEGSCGSPRSIKVFLGECNIDGLYA | 615 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma04g00843 | 615 | Gene3D | - | 139 | 324 | - | - | |
| Gma04g00843 | 615 | ProSitePatterns | Phosphoglucose isomerase signature 2. | 511 | 528 | IPR018189 | GO:0004347|GO:0006094|GO:0006096 | |
| Gma04g00843 | 615 | PRINTS | Glucose-6-phosphate isomerase signature | 189 | 208 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Gma04g00843 | 615 | PRINTS | Glucose-6-phosphate isomerase signature | 301 | 319 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Gma04g00843 | 615 | PRINTS | Glucose-6-phosphate isomerase signature | 377 | 398 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Gma04g00843 | 615 | PRINTS | Glucose-6-phosphate isomerase signature | 479 | 497 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Gma04g00843 | 615 | PRINTS | Glucose-6-phosphate isomerase signature | 497 | 511 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Gma04g00843 | 615 | PRINTS | Glucose-6-phosphate isomerase signature | 511 | 524 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Gma04g00843 | 615 | Gene3D | - | 325 | 520 | - | - | |
| Gma04g00843 | 615 | PANTHER | GLUCOSE-6-PHOSPHATE ISOMERASE | 1 | 615 | - | - | |
| Gma04g00843 | 615 | PANTHER | GLUCOSE-6-PHOSPHATE ISOMERASE | 1 | 615 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Gma04g00843 | 615 | CDD | SIS_PGI_2 | 370 | 534 | IPR035482 | - | |
| Gma04g00843 | 615 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Gma04g00843 | 615 | SUPERFAMILY | SIS domain | 76 | 538 | IPR046348 | GO:0097367|GO:1901135 | |
| Gma04g00843 | 615 | ProSiteProfiles | Glucose-6-phosphate isomerase family profile. | 21 | 544 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Gma04g00843 | 615 | Hamap | Glucose-6-phosphate isomerase [pgi]. | 25 | 538 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Gma04g00843 | 615 | Pfam | Phosphoglucose isomerase | 476 | 536 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Gma04g00843 | 615 | Pfam | Phosphoglucose isomerase | 119 | 445 | IPR001672 | GO:0004347|GO:0006094|GO:0006096 | |
| Gma04g00843 | 615 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Gma04g00843 | 615 | CDD | SIS_PGI_1 | 158 | 324 | IPR035476 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma04g00843 | Gma-Chr4 | 8265515 | 8270913 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma04g00843 | K01810 | - | gmx:100791285 | 1226.08 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma04g00843 | 04 | 8265515 | 8270913 | Gma04g00843 | 04 | 8265515 | 8270913 | ECH |