Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00841 ATGACCAACACAAGTGCAGAATTGTCTCAGGGAAATGGTGGTGTTTCTATTCCCCCTCCTAATTCCCAGTCTGGGCCACAAGAGCAAAATCTGCGTTCTCAAGGTGGAAGCGGCAATATGATTTTCAAGAGTGGACCACTTTTCATATCTTCCAAAGGAATTGGGTGGACATCCTGGAAGAAAAGGTGGTTTATTTTAACACAAACTTCACTTGTTTTCTTCAGAAGTGATCCAAATGCTGTCTCTCAGAAGGGAAATGAAGTGAATTTGACCCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTATCAAAGCAGATAAGAAACTTTTGACTGTACAATTTCCTGATGTTCATGATGGACGAGCTTTCACACTTAAGGCTGAAACTACGGAGGATTTATATGAGTGGAAGACTGCACTTGAGAATGCTTTGGCACTAGCACCTAGTGCTGCCAATGTGACAGAGCAAAATGGTATCTTCAGGAACGATCAGACTGATTCAATTGATATTTCTTTGGACCAGTTGAAGGATAGAGAACCAGTTAAATCTACCGTTGTTGGCCGGCCAATTTTACTTGCTTTGGAGGATGTTGATGGAACTCCATCATTTTTGGAGAAAGCCCTAACATTCATAGAAGAGCATGGAGCCAACATAGAAGGAATCTTGCGACAAGCAGCTGATGTTGATGAGGTTGAACGTCGAGTTCGGGAATATGAACAAGGAAAAGTTGAGTTTTCTCCAGACGAGGATGCACATGTTGTTGGTGACTGTGTTAAGCATGTAATTCGCGAATTGCCATCTTCTCCAGTCCCCGCATCTTGTTGTAAAGCACTGTTAGAAGCTTGTCGAACTGAGCGTGGTAGTAGGGTTGCTTCTATGCGTGCAGCAATAAATGACACTTTCCCTGAACCAAATCGCCGCTTACTGCAAAGAATACTTATGATGATGCAAACTGTGGCTTCACGCAAAGCTGTGAATAGAATGAGCTCCTCAGCTGTGGCAGCTTGCATGGCGCCTTTACTTCTTCGCCCCCTTCTGGCTGGGGAATGTGAAATTGAAAATGATTTTGATGTAGGTGGTGATGGTTCTGTTCAACTTTTACAAGCAGCTGCTGCGGCAAACCATGCTCAAGCAATTTGTATAACCTTATTAGAAGAATATAGCAGCATATTTGGGGAAGGTTCTGTGACCCCTGATATATACACCGACTCAGAAGAAGAGAGTGGATCTGAGAGTGAGGAGGCAACtgatgatgatgatgatgatgatgatttgtcctatgattatgatgatgatgatgatgaACAAGATGAATCAATACACGAGTCTGATGCAGATGATGATCTTGTTAGTGAATCGTACAGCGGAACTGGAGATTCCGAGGCTGATGATGAGGACCATGATCATGCTAGTTCAAGTTCAAAATCCTCAGGTAAGAGTGAAAAATTGAAAGCCTCTCGGAAGTTATCATCAAAGTCACTTGAAGGCTCACTGACTCAACATGAAGATATTAAAAGCCTTGAACATGTCCCGAGTCCAAAGAAGACTGGCTATATAGATCAGTCCTATAAGCCTGATGATATAGTTGGAGGAGTTTCCACTGATGAAGCTACATTGCATAATTCAAATTCTCCTAGCCCTGCTTCATGTATCAAAAAATCCAATACCATGTCCAATGGCCCAGCACCTCGGCATCGCACCATATTGGGTCGCACCTCTGCAAGGAAGAATCTTTCCATGGAATCCATTGATTTTCCTATTGAAGATGAAGATGAAATTGAAAGGCTTGAAGCTGCCAGGACAGAATTACAAACCCAAATTGACAAGGAGGTGAAGGCAAATGAACAGCTGCAATCTCATGTGGATAAACAAAAGAAAGCCTTGGAAGAGCGTCATCTAGCTCTTGAGCAAGACGTAGCTAGACTACAGGAACAGTTGCACAAGGAAAAGAATTCTCGGGTAGCTCTTGAGAACAAAGCAGAGCTTGAGGAATTAGCTCTGGTAGAAGCAGATCTTGCCAACTTAGAGTGGAAGGTTGATGAGATTGGGGTGAGGCTTAATGAACTTGAGCAGAATTATGGAACTACTTCGGATTCCTCTATTCAACTGCGACAGATATCAAATCATGAAAGAAAATTGAAACGCAAGACAGATGCTGAAGTTGCTGCTATGTCACAATCTGACAGATCAATAAGTAAGGGTACGGTAATGGCACAACAGGACACTCATATTGGTGGAGCAGAAAATGATTTCGAGAGAAAGCCTGATTCACCACCTTTACCAAACAAGCACCCACCAACTAGCTCCAAGCGATCTGGTACAAAGGGTGAGGTGGGACGAAGTCAGACTCCAAATGAACTCCAAAATATGGATAAAGGCCGAGACTCAAGTCGCTATTCAATCAATGTGGAAAAAGGAAAAGGATCTGAACGTCCCCAATCacttctatcccccaaactaccatctcctagacttccatctcccagacatccatcccccaACAGATTTGGAGGGTCTGAAGCTCACTCTGTGCCAAACCCAGAAAAGGGTAAAGGGTCAGAGCCAGTTCAGATTTCAGACAAATCGCATCAAAGTTCAGAGAAACTGAAAAAATCAGATAGCCAGCCAGCCCATCACTCAGATGGATGGAATCAACAACCAAAACACTTGGAGAGAGGAAGGTCAGAGGGTCATCAGACTTATAATGTGGATAAAGGTCGATGA 2730 0.4147 MTNTSAELSQGNGGVSIPPPNSQSGPQEQNLRSQGGSGNMIFKSGPLFISSKGIGWTSWKKRWFILTQTSLVFFRSDPNAVSQKGNEVNLTLGGIDLNNSGSVVIKADKKLLTVQFPDVHDGRAFTLKAETTEDLYEWKTALENALALAPSAANVTEQNGIFRNDQTDSIDISLDQLKDREPVKSTVVGRPILLALEDVDGTPSFLEKALTFIEEHGANIEGILRQAADVDEVERRVREYEQGKVEFSPDEDAHVVGDCVKHVIRELPSSPVPASCCKALLEACRTERGSRVASMRAAINDTFPEPNRRLLQRILMMMQTVASRKAVNRMSSSAVAACMAPLLLRPLLAGECEIENDFDVGGDGSVQLLQAAAAANHAQAICITLLEEYSSIFGEGSVTPDIYTDSEEESGSESEEATDDDDDDDDLSYDYDDDDDEQDESIHESDADDDLVSESYSGTGDSEADDEDHDHASSSSKSSGKSEKLKASRKLSSKSLEGSLTQHEDIKSLEHVPSPKKTGYIDQSYKPDDIVGGVSTDEATLHNSNSPSPASCIKKSNTMSNGPAPRHRTILGRTSARKNLSMESIDFPIEDEDEIERLEAARTELQTQIDKEVKANEQLQSHVDKQKKALEERHLALEQDVARLQEQLHKEKNSRVALENKAELEELALVEADLANLEWKVDEIGVRLNELEQNYGTTSDSSIQLRQISNHERKLKRKTDAEVAAMSQSDRSISKGTVMAQQDTHIGGAENDFERKPDSPPLPNKHPPTSSKRSGTKGEVGRSQTPNELQNMDKGRDSSRYSINVEKGKGSERPQSLLSPKLPSPRLPSPRHPSPNRFGGSEAHSVPNPEKGKGSEPVQISDKSHQSSEKLKKSDSQPAHHSDGWNQQPKHLERGRSEGHQTYNVDKGR 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00841 909 SMART PH_update 41 149 IPR001849 -
Gma04g00841 909 Gene3D Rho GTPase activation protein 171 394 IPR008936 GO:0007165
Gma04g00841 909 MobiDBLite consensus disorder prediction 397 577 - -
Gma04g00841 909 MobiDBLite consensus disorder prediction 793 807 - -
Gma04g00841 909 SMART RhoGAP_3 200 390 IPR000198 GO:0007165
Gma04g00841 909 MobiDBLite consensus disorder prediction 406 447 - -
Gma04g00841 909 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 4 798 - -
Gma04g00841 909 SUPERFAMILY GTPase activation domain, GAP 202 395 IPR008936 GO:0007165
Gma04g00841 909 Coils Coil 595 618 - -
Gma04g00841 909 MobiDBLite consensus disorder prediction 695 909 - -
Gma04g00841 909 MobiDBLite consensus disorder prediction 1 36 - -
Gma04g00841 909 MobiDBLite consensus disorder prediction 725 741 - -
Gma04g00841 909 CDD RhoGAP 203 341 - -
Gma04g00841 909 ProSiteProfiles Rho GTPase-activating proteins domain profile. 194 393 IPR000198 GO:0007165
Gma04g00841 909 CDD PH 43 142 - -
Gma04g00841 909 MobiDBLite consensus disorder prediction 537 564 - -
Gma04g00841 909 Coils Coil 627 694 - -
Gma04g00841 909 SUPERFAMILY PH domain-like 13 147 - -
Gma04g00841 909 Pfam RhoGAP domain 203 346 IPR000198 GO:0007165
Gma04g00841 909 MobiDBLite consensus disorder prediction 768 792 - -
Gma04g00841 909 MobiDBLite consensus disorder prediction 886 909 - -
Gma04g00841 909 MobiDBLite consensus disorder prediction 863 879 - -
Gma04g00841 909 MobiDBLite consensus disorder prediction 462 491 - -
Gma04g00841 909 MobiDBLite consensus disorder prediction 707 724 - -
Gma04g00841 909 Pfam PH domain 43 146 IPR001849 -
Gma04g00841 909 ProSiteProfiles PH domain profile. 40 147 IPR001849 -
Gma04g00841 909 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 4 798 - -
Gma04g00841 909 Gene3D - 28 148 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00841 Gma-Chr4 8233133 8247251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00841 - - gmx:100796201 1589.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00841 04 8233133 8247251 Gma04g00841 04 8233133 8247251 ECH
Gma04g00841 04 8233133 8247251 Gma06g00832 06 7647862 7659658 GST