Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00840 ATGAGTCTTAAGGGATTTTTCGAGGGTGGTGTCGCTTCCATCGTCGCAGGCTGCACCACTCACCCACTCGACCTCATCAAAGTTCGAATGCAACTTCAAGAAACCCACACTCTCCGCCCAGCCTTTGCCTTTCACGGTCCCACTCCAATGCCTCCTCCGCCGCCCTCCGGCCCCATCTCCGTCGGCCTCCGCATCGTTCAGTCGGAGGGACTCGCCGCTCTTTTCTCCGGCGTCTCCGCCACCGTCCTCCGCCAGACGCTCTACTCCACCACCCGCATGGGCCTCTACGACGTCCTCAAGCGCCACTGGACCGACCCCGACCGCGGAACCATGCCCCTCACAAGAAAAATCACGGCCGGGCTCGTCGCCGGCGGGATCGGAGCCGCCGTGGGCAACCCCGCCGACGTGGCGATGGTGCGAATGCAGGCCGACGGGCGCCTCCCGCCGGCGGAGCGGCGCAACTACAACGGCGTGTTCGACGCGATACGGCGCATGAGTAACCAAGAAGGCGTTGGTAGCCTGTGGCGCGGTTCAGCGCTTACGGTGAACCGCGCGATGATCGTTACGGCTTCTCAGTTGGCCTCGTACGACCAGTTTAAGGAAAGCATTTTAGGACGCGGCTGGATGGAGGACGGGCTTGGGACCCACGTGTTAGCGAGTTTTGCGGCGGGTTTTGTGGCCTCGATTGCGTCGAACCCCATTGATGTTATAAAGACTAGGGTGATGAACATGAAGGCTGAGGCTTACAATGGGGCCTTGGATTGTGCTCTCAAGACTGTTAGGGCCGAAGGACCTCTTGCCCTTTATAAGGGTTTCATCCCTACAATTTCAAGGCAGGGTCCTTTCACCGTTGTCCTCTTTGTCACCCTCGAACAAGTCAGGAAGCTCTTCAAGGACTTTTGA 903 0.5947 MSLKGFFEGGVASIVAGCTTHPLDLIKVRMQLQETHTLRPAFAFHGPTPMPPPPPSGPISVGLRIVQSEGLAALFSGVSATVLRQTLYSTTRMGLYDVLKRHWTDPDRGTMPLTRKITAGLVAGGIGAAVGNPADVAMVRMQADGRLPPAERRNYNGVFDAIRRMSNQEGVGSLWRGSALTVNRAMIVTASQLASYDQFKESILGRGWMEDGLGTHVLASFAAGFVASIASNPIDVIKTRVMNMKAEAYNGALDCALKTVRAEGPLALYKGFIPTISRQGPFTVVLFVTLEQVRKLFKDF 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00840 300 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 1 300 - -
Gma04g00840 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 202 IPR018108 -
Gma04g00840 300 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 5-LIKE 1 300 - -
Gma04g00840 300 Pfam Mitochondrial carrier protein 111 204 IPR018108 -
Gma04g00840 300 Pfam Mitochondrial carrier protein 213 298 IPR018108 -
Gma04g00840 300 Pfam Mitochondrial carrier protein 4 104 IPR018108 -
Gma04g00840 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 211 296 IPR018108 -
Gma04g00840 300 SUPERFAMILY Mitochondrial carrier 3 293 IPR023395 -
Gma04g00840 300 PRINTS Mitochondrial brown fat uncoupling protein signature 96 108 IPR002030 GO:0006839|GO:0031966
Gma04g00840 300 PRINTS Mitochondrial brown fat uncoupling protein signature 165 182 IPR002030 GO:0006839|GO:0031966
Gma04g00840 300 PRINTS Mitochondrial brown fat uncoupling protein signature 208 226 IPR002030 GO:0006839|GO:0031966
Gma04g00840 300 PRINTS Mitochondrial brown fat uncoupling protein signature 285 300 IPR002030 GO:0006839|GO:0031966
Gma04g00840 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 102 IPR018108 -
Gma04g00840 300 Gene3D Mitochondrial carrier domain 4 299 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00840 Gma-Chr4 8231090 8232117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00840 1 299 Miscellaneous Gene Families AT5G09470 58.683 2.82e-120 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00840 K15104 - gmx:100790234 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00840 04 8231090 8232117 Gma04g00840 04 8231090 8232117 ECH
Gma04g00840 04 8231090 8232117 Gma06g00831 06 7643536 7647151 GST