Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00815 ATGGCCTCTTTTCGACGGACTCTGTCGCCGGCGTATCCCGATCGCCAGTACCTTAACGGTTCGTTTTCAGTCTCCTCCCCGTCGCACAAGCTTCCGTCCTCAAACGCAAAGTACTCCTCGCCGCTGCCGGAGCTTGTGGCGGCGTTCCTTCGCCTCGCCGGCGGGGTGTTCACGCGCCGGCACGGTCGGAAGGGGCAGTGGAGGCGCGTGGTGGTCAGGTGCGTGCTGTGCTTCTTCGTTGGGTTCTTGCTAGGCATGTTCCCGTTCGGCCACGTGTCGGAGGACGTTCGCTCGCACGAAATCTCGTTTGAGATGAAGCCGCCGCCGCTGCCGCGCGCCGCGAACAACGCGCAGCAGCTGCTCCTCGAAGATCGCGTGCTTCGGAATCGCGTGGAGAGGGAGGGTTTGGTGATCGATCCGGTGAGTTTAAGCGCGGAGTGGGAGAGGCGGAGTGAGAGGTTCGATTTCACGCCGAGGAAGCCGCTGATTGTGGTGACGCCGACATACGACCGCGCGTTTCAGGCGTATTTCCTGAACCGGCTGGGGCAGGTGCTGCGGCTGGTGCCGCCGCCGGTGGTGTGGATTGTAGTGGAGATGAAGGCGGCGTCGATGGAGACAGCGGAGGTACTGAGGAAGACGGGCGTGATGTACAGGCATTTGGTGTGCAATAGGAATTCGACGGATGTGAAGGACAGAGGGGTTCACCAGAGGAACACGGCGTTGGAACACATTGAGCGTCATAGGCTTGATGGAATTGTTTACTTTGCGGATGATGATAATGTGTATTCTCTCGAGTTGTTTGACGCCTTGAGAGATATCAGCCGCTTTGGCACTTGGCCTGTTGCCATGCTTGCGCCAAGCAAAAACAAGGCCATTTTGGAGGGTCCTGTATGCAATGCAAGCCAAGTGATTGGATGGCATACAAATGAGAAAAGTAAAAGACTTCGTAGATTCCATGTTGATATGTCTGGATTTGCATTCAACAGCACAATCTTGTGGGATCCAAAACGATGGCGACGCCCTTCTTCAAATCCCGTACGACAGTTAGACACAGTGAAGGAGGGTTTTCAAGAGACCACCTTTATAGAACAATTGGTGGAAGATGAAAGTCAAATGGAAGGTTCACCTCCTGGTTGTTCAAAAATATTGAATTGGCATCTCCATTTGGCTGCTAATAATATAGTTTACCCAAAAGGTTGGGTGCTTCAGAAAAACCTAGATGCTGTCATACCTGTCAAGTAA 1242 0.5386 MASFRRTLSPAYPDRQYLNGSFSVSSPSHKLPSSNAKYSSPLPELVAAFLRLAGGVFTRRHGRKGQWRRVVVRCVLCFFVGFLLGMFPFGHVSEDVRSHEISFEMKPPPLPRAANNAQQLLLEDRVLRNRVEREGLVIDPVSLSAEWERRSERFDFTPRKPLIVVTPTYDRAFQAYFLNRLGQVLRLVPPPVVWIVVEMKAASMETAEVLRKTGVMYRHLVCNRNSTDVKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLELFDALRDISRFGTWPVAMLAPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPSSNPVRQLDTVKEGFQETTFIEQLVEDESQMEGSPPGCSKILNWHLHLAANNIVYPKGWVLQKNLDAVIPVK 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00815 413 Pfam Glycosyltransferase family 43 181 389 IPR005027 GO:0015018|GO:0016020
Gma04g00815 413 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 161 407 IPR029044 -
Gma04g00815 413 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 410 IPR005027 GO:0015018|GO:0016020
Gma04g00815 413 PANTHER GLYCOSYLTRANSFERASES 1 410 - -
Gma04g00815 413 SUPERFAMILY Nucleotide-diphospho-sugar transferases 161 406 IPR029044 -
Gma04g00815 413 CDD GlcAT-I 160 391 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00815 Gma-Chr4 7890635 7894960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00815 1 413 Glycosyltransferase AT1G27600 62.470 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00815 K20869 - gmx:100789348 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00815 04 7890635 7894960 Gma04g00815 04 7890635 7894960 ECH
Gma04g00815 04 7890635 7894960 Gma06g00807 06 7389107 7393327 GST