Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00812 ATGTGTAATCCGAAACCATCGTCATCATCCCCATTTCTGTGTCCCACAAAAAACCACATCATAACTCCCGACCCCAAACTCATAAATCACCCTCCTCCCGTTGATGATCAACTTAAAGATGAACTTCACAGATGGCCAACGCCTAATGAGGTGATAGCAGAAATGAAGGCCATAGGGAAGATATCAGGCCCAACAGCTCTAACCGGTTTAATCCTATATTCCAGAGCCATGATCTCCATGGTCTTCCTGGGCTACCTCGGCGAGATGGAGCTCGCCGGAGGCTCCCTCTCGATCGGGTTCGCCAACATCACCGGCTACTCCGTGATCTCCGGGCTTGCCATGGGAATGGAACCCATTTGCGGGCAAGCCTACGGCGCCAAGCAATTGAAGACCCTGGGCCTAACCCTCCAGAGAACCGTCCTCCTCCTCCTCTCAACCTCCCTCCCCATCTCCCTGACGTGGCTGAACATGAAGAACATCCTCTTATGGTGCGGCCAAGACCAGCAGATCTCCTCCACCGCGCAAACCTTCATCATCTTCTCCATCCCCGACCTCTTCCTCCTCTCCCTCCTCCACCCTCTGAGAATCTACCTCCGAACACAAAGCATCACGTTACCCCTCACCTACTGCTCCGCAATCTCCGTCCTCCTCCACGTCCCTCTCAACTTCCTATTAGTTGTCCACTTTAAAATGGGAGTGTCTGGCGTTGCAATAGCCATGGTGTGGACCAACCTAAACCTCTTCATCTTCCTTTCTTCCTTTGTTTACTTCTCTCGTGTCTACAAGGACTCGTGGGTTCCCCCTAGCACCGACTGCCTCAGGGGATGGTCTTCCCTTCTCGCACTAGCTGTTCCTAACTGCGTCTCCGTCTGTCTCGAGTGGTGGTGGTACGAACTCATGATCATTCTCTGCGGACTCCTTCTCAACCCAAAATCCACCATTGCCTCCATGGGAATCCTTATTCAGACAACTGCGTTGGTCTACGTCTTCCCTTCGTCTCTCAGCCTCGCCGTCTCCACCAGAGTGGGGAACGAGTTAGGCGCCAACCGCCCCGCCAAAGCCCGCATTTCCATGATAGTCTCACTCGCCTGTGCTGTTGCCTTGGGCGTCGCCGCCATGCTCTTCACCACACTCATGAGACACCGGTTGGGGAGATTCTTCACCTCTGACCGAGAAATCCTCCACCTTACGTCTATTGCGCTGCCCATTGTGGGCCTCTGCGAGCTCGGGAACTGCCCGCAGACCACGGGCTGCGGCGTGTTAAGAGGCAGCGCCAGGCCCACCGTCGGAGCGAATATCAATTTGGGCTCGTTTTATTTGGTGGGCATGCCCGTTGCGGTTCTTCTCGGGTTTGTCGGGAAAATGGGCTTTCCTGGGCTCTGGCTTGGGTTGCTTGCGGCCCAAGCCTCTTGTGCTTCTCTCATGATATTCGTTCTCTGCACCACTGACTGGAACGCGCAAGTGCGGAGGGCCAACGAACTTACTAATGCTAATTCTGCTCCGTTCAAGCAAACGGAGTACTGTAACAATGTTCGTCTTCGAGAGATTGTTGCCACGGAGGATCATGATCATGAGATTACCAACAGACCCTCTCATTATACACACTATAAATAA 1614 0.5359 MCNPKPSSSSPFLCPTKNHIITPDPKLINHPPPVDDQLKDELHRWPTPNEVIAEMKAIGKISGPTALTGLILYSRAMISMVFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQLKTLGLTLQRTVLLLLSTSLPISLTWLNMKNILLWCGQDQQISSTAQTFIIFSIPDLFLLSLLHPLRIYLRTQSITLPLTYCSAISVLLHVPLNFLLVVHFKMGVSGVAIAMVWTNLNLFIFLSSFVYFSRVYKDSWVPPSTDCLRGWSSLLALAVPNCVSVCLEWWWYELMIILCGLLLNPKSTIASMGILIQTTALVYVFPSSLSLAVSTRVGNELGANRPAKARISMIVSLACAVALGVAAMLFTTLMRHRLGRFFTSDREILHLTSIALPIVGLCELGNCPQTTGCGVLRGSARPTVGANINLGSFYLVGMPVAVLLGFVGKMGFPGLWLGLLAAQASCASLMIFVLCTTDWNAQVRRANELTNANSAPFKQTEYCNNVRLREIVATEDHDHEITNRPSHYTHYK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00812 537 CDD MATE_eukaryotic 54 490 IPR045069 GO:0042910|GO:1990961
Gma04g00812 537 PANTHER PROTEIN DETOXIFICATION 32 507 - -
Gma04g00812 537 Pfam MatE 285 448 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma04g00812 537 Pfam MatE 64 224 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma04g00812 537 PANTHER MULTIDRUG RESISTANCE PROTEIN 32 507 - -
Gma04g00812 537 TIGRFAM matE: MATE efflux family protein 66 461 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00812 Gma-Chr4 7833134 7835153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00812 K03327 - gmx:100786872 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00812 04 7833134 7835153 Gma04g00812 04 7833134 7835153 ECH
Gma04g00812 04 7833134 7835153 Gma06g00806 06 7362488 7364474 GST