Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00800 ATGGCTTCTTCTTCTTCTTCTTCCTCCTCTCTTCCTAATCTTCATCCATCACATCGTGCTGAAGTACGCATCGTGACGAAGGCGTCTGAACTCCCCGCTGCATTTCTTGCACCCTCCCCGTCGTCGAAGCTGGTGATCGGTTTCGACAACGAGGGCGTGAAACTGGGCCGCGATGGCACTCTCTGCGTGATGCAGCTGGCGTTCGACGACGCCATATACATCGTGGACACCATCGAAGGCGAAGAGAATCTCGTAATGAAAGCTTGCAAGGCGGCGCTGGAGTCCGAACACGTGACAAAGGTGATCCACGACTGCAAACGCGACAGCGAGGCCTTGTACTTCCAGTTCGGCATCAGGCTAAACAACGTGGTGGACACGCAGATCGCGTACTCGCTCATAGAGTCGCAAGAGCAAGGAAAGAAGGTAAACGACTACATCTCCTTCGTCGACCTTCTCGCAGATCCGCGTTACTGCGGCGTAGCGTATCCGGAGAAGGAAGAGGTTCGCTTAATCCTGAAAAGGAACACCGAGTTTTGGAGAGAGAGACCGTTGACCGAGTATAAGTTGAATGCTGCTGCTGCTGATGTTCGTTATCTTATACACATTTACCACAAGATGATGGAGAAGCTGAGTGAGAAATCTTTATGGTATCTTGCGGTTCGTGGTGGATTGTATTGCCGGTGTTTCTGCGGGAACGCTGAGAATTGGCCACCTCTGGCTCCGGAAGCGCTGAAAGATGAGAACGGAAAGGGACCGGAGGAAGAAAGGATTTGGGTGTTGGATATTCCGGCGGGAGGGTGGGCGAGAGAAGTTATTGGGGACGGAGGGATAACAATTAGGAATCTTAGGAAGGCCAGCGATGCAGAAATCCACATTGTTGAAAGGCCACCGGATGACAAGGCCTTCATCATCGGAACAGAGAAGGAGGCCAAGAAAGCCATGGCTATGGTACGTGGTGTCTGGGAACATTCCGAAATCAGTTAG 984 0.5193 MASSSSSSSSLPNLHPSHRAEVRIVTKASELPAAFLAPSPSSKLVIGFDNEGVKLGRDGTLCVMQLAFDDAIYIVDTIEGEENLVMKACKAALESEHVTKVIHDCKRDSEALYFQFGIRLNNVVDTQIAYSLIESQEQGKKVNDYISFVDLLADPRYCGVAYPEKEEVRLILKRNTEFWRERPLTEYKLNAAAADVRYLIHIYHKMMEKLSEKSLWYLAVRGGLYCRCFCGNAENWPPLAPEALKDENGKGPEEERIWVLDIPAGGWAREVIGDGGITIRNLRKASDAEIHIVERPPDDKAFIIGTEKEAKKAMAMVRGVWEHSEIS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00800 327 Gene3D - 2 221 IPR036397 GO:0003676
Gma04g00800 327 CDD KH-I 268 317 - -
Gma04g00800 327 Pfam 3'-5' exonuclease 23 210 IPR002562 GO:0003676|GO:0006139|GO:0008408
Gma04g00800 327 Gene3D K Homology domain, type 1 246 323 IPR036612 GO:0003723
Gma04g00800 327 SMART 35exoneu6 22 211 IPR002562 GO:0003676|GO:0006139|GO:0008408
Gma04g00800 327 SMART kh_6 254 322 IPR004087 GO:0003676
Gma04g00800 327 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 258 322 IPR036612 GO:0003723
Gma04g00800 327 PANTHER - 22 319 - -
Gma04g00800 327 SUPERFAMILY Ribonuclease H-like 9 218 IPR012337 -
Gma04g00800 327 PANTHER EGALITARIAN, ISOFORM B 22 319 - -
Gma04g00800 327 Pfam KH domain 262 318 IPR004088 GO:0003723
Gma04g00800 327 ProSiteProfiles Type-1 KH domain profile. 271 317 - -
Gma04g00800 327 CDD Egl_like_exo 35 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00800 Gma-Chr4 7634747 7635730 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00800 K18740 - gmx:100784751 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00800 04 7634747 7635730 Gma04g00800 04 7634747 7635730 ECH